RNA–Protein interactions for RNA: YEL004W

YEA4, Transcript of Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter, yeast

Gene YEA4, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEA4	YEL004W	RPL43B	P0CX26	92 aa		0.96	□□□□□ -2.26
YEA4	YEL004W	YJR128W	P47162	119 aa		0.96	□□□□□ -2.26
YEA4	YEL004W	YPL225W	Q08971	146 aa	Known RBP	0.96	□□□□□ -2.26
YEA4	YEL004W	GEA2	P39993	1459 aa	Known RBP	0.96	□□□□□ -2.26
YEA4	YEL004W	TOP2	P06786	1428 aa	Known RBP	0.96	□□□□□ -2.26
YEA4	YEL004W	SRB6	P32570	121 aa		0.95	□□□□□ -2.26
YEA4	YEL004W	YOL118C	Q08259	102 aa		0.95	□□□□□ -2.26
YEA4	YEL004W	IMP2	P46972	177 aa		0.94	□□□□□ -2.26
YEA4	YEL004W	RSM19	P53733	91 aa	Predicted RBP	0.94	□□□□□ -2.26
YEA4	YEL004W	MIX14	Q04341	121 aa		0.94	□□□□□ -2.26
YEA4	YEL004W	ZEO1	Q08245	113 aa		0.94	□□□□□ -2.26
YEA4	YEL004W	KSH1	Q8TGJ3	72 aa		0.94	□□□□□ -2.26
YEA4	YEL004W	BPT1	P14772	1559 aa		0.94	□□□□□ -2.26
YEA4	YEL004W	YRF1-6	P53819	1859 aa		0.93	□□□□□ -2.26
YEA4	YEL004W	CAT8	P39113	1433 aa		0.93	□□□□□ -2.26
YEA4	YEL004W	CCW14	O13547	238 aa		0.93	□□□□□ -2.26
YEA4	YEL004W	YLR255C	O13574	117 aa		0.92	□□□□□ -2.26
YEA4	YEL004W	YDR210W	Q03482	75 aa		0.92	□□□□□ -2.26
YEA4	YEL004W	HFA1	P32874	2273 aa		0.91	□□□□□ -2.26
YEA4	YEL004W	PAU5	P43575	122 aa		0.91	□□□□□ -2.26
YEA4	YEL004W	YCR095W-A	Q3E787	52 aa		0.91	□□□□□ -2.26
YEA4	YEL004W	YOR289W	Q12012	251 aa	Predicted RBP	0.9	□□□□□ -2.27
YEA4	YEL004W	YPL038W-A	Q3E7B4	63 aa		0.9	□□□□□ -2.27
YEA4	YEL004W	YLR307C-A	Q3E825	87 aa		0.9	□□□□□ -2.27
YEA4	YEL004W	RPA190	P10964	1664 aa	Known RBP	0.9	□□□□□ -2.27
YEA4	YEL004W	YLR157W-E	P0CF00	54 aa		0.89	□□□□□ -2.27
YEA4	YEL004W	ROX3	P25046	220 aa		0.89	□□□□□ -2.27
YEA4	YEL004W	NTE1	Q04958	1679 aa		0.88	□□□□□ -2.27
YEA4	YEL004W	RSF2	P46974	1380 aa		0.88	□□□□□ -2.27
YEA4	YEL004W	YHL005C	P38752	130 aa		0.88	□□□□□ -2.27
YEA4	YEL004W	YIL086C	P40503	102 aa		0.88	□□□□□ -2.27
YEA4	YEL004W	EMC5	P40540	141 aa		0.88	□□□□□ -2.27
YEA4	YEL004W	SNA2	P56508	79 aa		0.88	□□□□□ -2.27
YEA4	YEL004W	RRT15	Q3E811	62 aa		0.88	□□□□□ -2.27
YEA4	YEL004W	HMRA1	P0CY11	126 aa		0.87	□□□□□ -2.27
YEA4	YEL004W	GCV3	P39726	170 aa	Predicted RBP	0.87	□□□□□ -2.27
YEA4	YEL004W	LAA1	P39526	2014 aa		0.87	□□□□□ -2.27
YEA4	YEL004W	SRB8	P25648	1427 aa		0.87	□□□□□ -2.27
YEA4	YEL004W	PDR10	P51533	1564 aa		0.87	□□□□□ -2.27
YEA4	YEL004W	PAU6	P0CE90	120 aa		0.86	□□□□□ -2.27
YEA4	YEL004W	PAU18	P0CE91	120 aa		0.86	□□□□□ -2.27
YEA4	YEL004W	AUA1	P32450	94 aa		0.86	□□□□□ -2.27
YEA4	YEL004W	YBL071C	P38185	102 aa		0.86	□□□□□ -2.27
YEA4	YEL004W	SHU1	P38751	150 aa		0.86	□□□□□ -2.27
YEA4	YEL004W	MSL1	P40567	111 aa	Predicted RBP	0.86	□□□□□ -2.27
YEA4	YEL004W	MRX7	P53869	86 aa		0.86	□□□□□ -2.27
YEA4	YEL004W	COX12	Q01519	83 aa		0.86	□□□□□ -2.27
YEA4	YEL004W	SEC7	P11075	2009 aa	Known RBP	0.86	□□□□□ -2.27
YEA4	YEL004W	TY4B-H	P0C2J7	1802 aa		0.85	□□□□□ -2.27
YEA4	YEL004W	SEC16	P48415	2195 aa	Known RBP	0.84	□□□□□ -2.27
YEA4	YEL004W	MPC2	P38857	129 aa		0.84	□□□□□ -2.27
YEA4	YEL004W	YHR173C	P38864	112 aa		0.84	□□□□□ -2.27
YEA4	YEL004W	COX19	Q3E731	98 aa		0.84	□□□□□ -2.27
YEA4	YEL004W	YRF1-1	P0CX20	1796 aa		0.83	□□□□□ -2.28
YEA4	YEL004W	YRF1-5	P0CX21	1796 aa		0.83	□□□□□ -2.28
YEA4	YEL004W	YRF1-8	P0CX22	1796 aa		0.83	□□□□□ -2.28
YEA4	YEL004W	SSN2	P38931	1420 aa		0.83	□□□□□ -2.28
YEA4	YEL004W	MRP17	P28778	131 aa		0.83	□□□□□ -2.28
YEA4	YEL004W	NHP10	Q03435	203 aa		0.83	□□□□□ -2.28
YEA4	YEL004W	YDR029W	Q12111	104 aa		0.83	□□□□□ -2.28
YEA4	YEL004W	YNR034W-A	Q3E841	98 aa		0.83	□□□□□ -2.28
YEA4	YEL004W	MRPL38	P35996	138 aa	Predicted RBP	0.82	□□□□□ -2.28
YEA4	YEL004W	SPC1	P46965	94 aa		0.82	□□□□□ -2.28
YEA4	YEL004W	ICY1	Q04329	127 aa		0.82	□□□□□ -2.28
YEA4	YEL004W	YBR072C-A	Q3E794	53 aa		0.82	□□□□□ -2.28
YEA4	YEL004W	YCR075W-A	Q3E830	75 aa		0.82	□□□□□ -2.28
YEA4	YEL004W	YCL001W-B	Q96VH2	84 aa		0.82	□□□□□ -2.28
YEA4	YEL004W	SWR1	Q05471	1514 aa		0.81	□□□□□ -2.28
YEA4	YEL004W	RSM18	P40033	138 aa		0.81	□□□□□ -2.28
YEA4	YEL004W	PAU20	Q08322	120 aa		0.81	□□□□□ -2.28
YEA4	YEL004W	YDR010C	Q12426	110 aa		0.81	□□□□□ -2.28
YEA4	YEL004W	MYO1	P08964	1928 aa		0.81	□□□□□ -2.28
YEA4	YEL004W	PAU1	P0CE88	120 aa		0.8	□□□□□ -2.28
YEA4	YEL004W	PAU14	P0CE89	120 aa		0.8	□□□□□ -2.28
YEA4	YEL004W	PAU8	P0CE92	120 aa		0.8	□□□□□ -2.28
YEA4	YEL004W	PAU11	P0CE93	120 aa		0.8	□□□□□ -2.28
YEA4	YEL004W	PAU13	P38725	120 aa		0.8	□□□□□ -2.28
YEA4	YEL004W	AIM19	P40502	157 aa		0.8	□□□□□ -2.28
YEA4	YEL004W	PAU10	Q03050	120 aa		0.8	□□□□□ -2.28
YEA4	YEL004W	YDR042C	Q03205	200 aa		0.8	□□□□□ -2.28
YEA4	YEL004W	PAU9	Q3E770	120 aa		0.8	□□□□□ -2.28
YEA4	YEL004W	SUS1	Q6WNK7	96 aa		0.8	□□□□□ -2.28
YEA4	YEL004W	YBR292C	P38357	123 aa		0.79	□□□□□ -2.28
YEA4	YEL004W	SKI3	P17883	1432 aa	Known RBP	0.79	□□□□□ -2.28
YEA4	YEL004W	POL1	P13382	1468 aa		0.79	□□□□□ -2.28
YEA4	YEL004W	GDB1	Q06625	1536 aa		0.79	□□□□□ -2.28
YEA4	YEL004W	SNF2	P22082	1703 aa		0.78	□□□□□ -2.28
YEA4	YEL004W	RPS11A	P0CX47	156 aa	Known RBP	0.78	□□□□□ -2.28
YEA4	YEL004W	RPS11B	P0CX48	156 aa	Known RBP	0.78	□□□□□ -2.28
YEA4	YEL004W	SNU13	P39990	126 aa	Known RBP	0.78	□□□□□ -2.28
YEA4	YEL004W	PAU4	P53427	120 aa		0.78	□□□□□ -2.28
YEA4	YEL004W	BNI1	P41832	1953 aa		0.77	□□□□□ -2.29
YEA4	YEL004W	YRF1-2	P40105	1681 aa		0.76	□□□□□ -2.29
YEA4	YEL004W	ESC1	Q03661	1658 aa	Known RBP	0.76	□□□□□ -2.29
YEA4	YEL004W	YMR082C	Q04276	118 aa		0.76	□□□□□ -2.29
YEA4	YEL004W	MHF2	Q3E829	80 aa		0.76	□□□□□ -2.29
YEA4	YEL004W	RIM15	P43565	1770 aa		0.75	□□□□□ -2.29
YEA4	YEL004W	ECM12	O13529	151 aa		0.75	□□□□□ -2.29
YEA4	YEL004W	RPA12	P32529	125 aa	Known RBP	0.75	□□□□□ -2.29
YEA4	YEL004W	YGL194C-A	Q2V2P6	80 aa		0.75	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms