RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W FYV7Q12247 151 aa1.24□□□□□ -2.21
CFT1YDR301W Q0255P03881 472 aa1.24□□□□□ -2.21
CFT1YDR301W RPL31AP0C2H8 113 aaKnown RBP1.24□□□□□ -2.21
CFT1YDR301W YKR070WP36151 352 aaKnown RBP1.24□□□□□ -2.21
CFT1YDR301W MRPL28P36527 147 aa1.24□□□□□ -2.21
CFT1YDR301W ERG28P40030 148 aa1.24□□□□□ -2.21
CFT1YDR301W DIA1P54005 336 aa1.24□□□□□ -2.21
CFT1YDR301W CNL1Q06333 122 aa1.24□□□□□ -2.21
CFT1YDR301W YOR011W-AQ3E807 68 aa1.24□□□□□ -2.21
CFT1YDR301W YKR032WP36127 104 aa1.24□□□□□ -2.21
CFT1YDR301W YFL067WP43537 175 aa1.24□□□□□ -2.21
CFT1YDR301W THG1P53215 237 aaKnown RBP1.24□□□□□ -2.21
CFT1YDR301W HTL1Q9URQ5 78 aa1.24□□□□□ -2.21
CFT1YDR301W RPL33AP05744 107 aaKnown RBP1.23□□□□□ -2.21
CFT1YDR301W SEC4P07560 215 aaKnown RBP1.23□□□□□ -2.21
CFT1YDR301W RPL33BP41056 107 aaKnown RBP1.23□□□□□ -2.21
CFT1YDR301W YJR146WP47174 117 aa1.23□□□□□ -2.21
CFT1YDR301W YGR017WP53210 297 aa1.23□□□□□ -2.21
CFT1YDR301W YMR122W-AQ3E842 84 aa1.23□□□□□ -2.21
CFT1YDR301W RPL23AP0CX41 137 aaKnown RBP1.23□□□□□ -2.21
CFT1YDR301W RPL23BP0CX42 137 aaKnown RBP1.23□□□□□ -2.21
CFT1YDR301W GSP1P32835 219 aaKnown RBP1.23□□□□□ -2.21
CFT1YDR301W GSP2P32836 220 aaKnown RBP1.23□□□□□ -2.21
CFT1YDR301W SPC1P46965 94 aa1.23□□□□□ -2.21
CFT1YDR301W YDL241WQ07738 123 aa1.23□□□□□ -2.21
CFT1YDR301W CUP2P15315 225 aa1.23□□□□□ -2.21
CFT1YDR301W YKL044WP36092 106 aa1.23□□□□□ -2.21
CFT1YDR301W COA3Q3E7B2 85 aa1.23□□□□□ -2.21
CFT1YDR301W YPL229WQ99395 206 aa1.23□□□□□ -2.21
CFT1YDR301W PAM17P36147 197 aa1.22□□□□□ -2.21
CFT1YDR301W PET8P38921 284 aa1.22□□□□□ -2.21
CFT1YDR301W PEX22P39718 180 aa1.22□□□□□ -2.21
CFT1YDR301W DCV1P43595 202 aa1.22□□□□□ -2.21
CFT1YDR301W OST3P48439 350 aa1.22□□□□□ -2.21
CFT1YDR301W ERV14P53173 138 aa1.22□□□□□ -2.21
CFT1YDR301W YLR194CQ05777 254 aa1.22□□□□□ -2.21
CFT1YDR301W PMP3P87284 55 aa1.22□□□□□ -2.21
CFT1YDR301W YIL014C-AQ02598 104 aa1.22□□□□□ -2.21
CFT1YDR301W ARL3Q02804 198 aa1.22□□□□□ -2.21
CFT1YDR301W TVP18Q04767 167 aa1.22□□□□□ -2.21
CFT1YDR301W SAL1D6W196 494 aa1.22□□□□□ -2.21
CFT1YDR301W DFM1Q12743 341 aaKnown RBP1.22□□□□□ -2.21
CFT1YDR301W YLL066W-BQ8TGJ7 56 aa1.22□□□□□ -2.21
CFT1YDR301W YOL085CQ99345 113 aa1.22□□□□□ -2.21
CFT1YDR301W SEC11P15367 167 aa1.21□□□□□ -2.22
CFT1YDR301W NRG2P38082 220 aa1.21□□□□□ -2.22
CFT1YDR301W YNL217WP40152 326 aa1.21□□□□□ -2.22
CFT1YDR301W YJL028WP47062 111 aa1.21□□□□□ -2.22
CFT1YDR301W ABF2Q02486 183 aa1.21□□□□□ -2.22
CFT1YDR301W POP7P38291 140 aa1.21□□□□□ -2.22
CFT1YDR301W YNL200CP40165 246 aaKnown RBP1.21□□□□□ -2.22
CFT1YDR301W LSM8P47093 109 aaKnown RBP1.21□□□□□ -2.22
CFT1YDR301W YPL080CQ02826 108 aa1.21□□□□□ -2.22
CFT1YDR301W DPP1Q05521 289 aa1.21□□□□□ -2.22
CFT1YDR301W YOR008C-AQ3E7B9 74 aa1.21□□□□□ -2.22
CFT1YDR301W ATP5P09457 212 aa1.21□□□□□ -2.22
CFT1YDR301W CPR1P14832 162 aaKnown RBP1.21□□□□□ -2.22
CFT1YDR301W SSS1P35179 80 aa1.21□□□□□ -2.22
CFT1YDR301W YER134CP40081 178 aa1.21□□□□□ -2.22
CFT1YDR301W RPC10P40422 70 aa1.21□□□□□ -2.22
CFT1YDR301W ARC15P40518 154 aaRIP-Chip data1.21□□□□□ -2.22not detected
CFT1YDR301W YGL230CP53074 147 aa1.21□□□□□ -2.22
CFT1YDR301W DGA1Q08650 418 aa1.21□□□□□ -2.22
CFT1YDR301W YKL183C-AQ3E765 70 aa1.21□□□□□ -2.22
CFT1YDR301W YMR175W-AQ3E766 64 aa1.21□□□□□ -2.22
CFT1YDR301W HUA1P40325 198 aa1.2□□□□□ -2.22
CFT1YDR301W YKL023C-AQ2V2P3 75 aa1.2□□□□□ -2.22
CFT1YDR301W RPL28P02406 149 aaKnown RBP1.2□□□□□ -2.22
CFT1YDR301W PEX17P40155 199 aa1.2□□□□□ -2.22
CFT1YDR301W POP3P53833 195 aaPredicted RBP1.2□□□□□ -2.22
CFT1YDR301W HAL1Q01766 294 aa1.2□□□□□ -2.22
CFT1YDR301W PKR1Q03880 122 aaKnown RBP1.2□□□□□ -2.22
CFT1YDR301W PAU23Q07987 124 aa1.2□□□□□ -2.22
CFT1YDR301W PAU17Q12370 124 aa1.2□□□□□ -2.22
CFT1YDR301W MDN1Q12019 4910 aaKnown RBP1.2□□□□□ -2.22
CFT1YDR301W RTC6O14464 93 aa1.2□□□□□ -2.22
CFT1YDR301W SPT4P32914 102 aaPredicted RBP1.2□□□□□ -2.22
CFT1YDR301W YPL073CP40323 161 aa1.2□□□□□ -2.22
CFT1YDR301W YDR115WQ04598 105 aa1.2□□□□□ -2.22
CFT1YDR301W PBA1Q05778 276 aa1.2□□□□□ -2.22
CFT1YDR301W YDL157CQ12082 118 aa1.2□□□□□ -2.22
CFT1YDR301W QCR8P08525 94 aa1.2□□□□□ -2.22
CFT1YDR301W PRE1P22141 198 aaKnown RBP1.2□□□□□ -2.22
CFT1YDR301W MRPS12P53732 153 aa1.2□□□□□ -2.22
CFT1YDR301W YPL257WQ08974 193 aa1.2□□□□□ -2.22
CFT1YDR301W RPL29P05747 59 aaPredicted RBP1.19□□□□□ -2.22
CFT1YDR301W APS1P35181 156 aa1.19□□□□□ -2.22
CFT1YDR301W YMR103CQ04436 120 aa1.19□□□□□ -2.22
CFT1YDR301W YOR020W-AQ3E824 90 aa1.19□□□□□ -2.22
CFT1YDR301W ENV10Q99382 181 aa1.19□□□□□ -2.22
CFT1YDR301W MRPL44P19956 98 aa1.19□□□□□ -2.22
CFT1YDR301W YEL008WP40001 126 aa1.19□□□□□ -2.22
CFT1YDR301W YMR320WQ04897 101 aa1.19□□□□□ -2.22
CFT1YDR301W ISD11Q6Q560 94 aa1.19□□□□□ -2.22
CFT1YDR301W YAL065CO13511 128 aa1.19□□□□□ -2.22
CFT1YDR301W MBF1O14467 151 aaKnown RBP1.19□□□□□ -2.22
CFT1YDR301W PBI2P0CT04 75 aaKnown RBP1.19□□□□□ -2.22
CFT1YDR301W YCR001WP25347 104 aa1.19□□□□□ -2.22
CFT1YDR301W SCM4P32564 187 aa1.19□□□□□ -2.22
CFT1YDR301W SHU1P38751 150 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms