RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	YPL225W	Q08971	146 aa	Known RBP	0.47	□□□□□ -2.33
SLU7	YDR088C	SEC16	P48415	2195 aa	Known RBP	0.47	□□□□□ -2.33
SLU7	YDR088C	MRPL31	P14063	131 aa	Predicted RBP	0.46	□□□□□ -2.34
SLU7	YDR088C	AUA1	P32450	94 aa		0.46	□□□□□ -2.34
SLU7	YDR088C	YBR090C	P38253	122 aa		0.46	□□□□□ -2.34
SLU7	YDR088C	YGR164W	P53291	111 aa		0.46	□□□□□ -2.34
SLU7	YDR088C	SCP1	Q08873	200 aa		0.46	□□□□□ -2.34
SLU7	YDR088C	YOR289W	Q12012	251 aa	Predicted RBP	0.46	□□□□□ -2.34
SLU7	YDR088C	YLR363W-A	Q3E747	85 aa		0.46	□□□□□ -2.34
SLU7	YDR088C	SNF2	P22082	1703 aa		0.46	□□□□□ -2.34
SLU7	YDR088C	TOP2	P06786	1428 aa	Known RBP	0.46	□□□□□ -2.34
SLU7	YDR088C	YRF1-1	P0CX20	1796 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	YRF1-5	P0CX21	1796 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	YRF1-8	P0CX22	1796 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	MDN1	Q12019	4910 aa	Known RBP	0.45	□□□□□ -2.34
SLU7	YDR088C	HMRA1	P0CY11	126 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	YBL071C	P38185	102 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	EMC5	P40540	141 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	NHP10	Q03435	203 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	YDR210W	Q03482	75 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	YMR090W	Q04304	227 aa	Known RBP	0.45	□□□□□ -2.34
SLU7	YDR088C	ZEO1	Q08245	113 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	YGL194C-A	Q2V2P6	80 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	YCR095W-A	Q3E787	52 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	MDS3	P53094	1487 aa		0.45	□□□□□ -2.34
SLU7	YDR088C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.45	□□□□□ -2.34
SLU7	YDR088C	RPA190	P10964	1664 aa	Known RBP	0.45	□□□□□ -2.34
SLU7	YDR088C	YPR117W	Q06116	2489 aa		0.44	□□□□□ -2.34
SLU7	YDR088C	MRP17	P28778	131 aa		0.44	□□□□□ -2.34
SLU7	YDR088C	SPC1	P46965	94 aa		0.44	□□□□□ -2.34
SLU7	YDR088C	YGR240C-A	Q3E786	66 aa		0.44	□□□□□ -2.34
SLU7	YDR088C	YCR075W-A	Q3E830	75 aa		0.44	□□□□□ -2.34
SLU7	YDR088C	YOS1	Q3E834	85 aa		0.44	□□□□□ -2.34
SLU7	YDR088C	YNR034W-A	Q3E841	98 aa		0.44	□□□□□ -2.34
SLU7	YDR088C	YCL001W-B	Q96VH2	84 aa		0.44	□□□□□ -2.34
SLU7	YDR088C	YLR419W	Q06698	1435 aa	Known RBP	0.44	□□□□□ -2.34
SLU7	YDR088C	URA2	P07259	2214 aa	Known RBP	0.44	□□□□□ -2.34
SLU7	YDR088C	BRR2	P32639	2163 aa	Known RBP	0.43	□□□□□ -2.34
SLU7	YDR088C	PAU8	P0CE92	120 aa		0.43	□□□□□ -2.34
SLU7	YDR088C	PAU11	P0CE93	120 aa		0.43	□□□□□ -2.34
SLU7	YDR088C	PAU13	P38725	120 aa		0.43	□□□□□ -2.34
SLU7	YDR088C	YHR138C	P38841	114 aa	Predicted RBP	0.43	□□□□□ -2.34
SLU7	YDR088C	GCV3	P39726	170 aa	Predicted RBP	0.43	□□□□□ -2.34
SLU7	YDR088C	YJR128W	P47162	119 aa		0.43	□□□□□ -2.34
SLU7	YDR088C	PAU4	P53427	120 aa		0.43	□□□□□ -2.34
SLU7	YDR088C	PAU10	Q03050	120 aa		0.43	□□□□□ -2.34
SLU7	YDR088C	PAU9	Q3E770	120 aa		0.43	□□□□□ -2.34
SLU7	YDR088C	CCW14	O13547	238 aa		0.42	□□□□□ -2.34
SLU7	YDR088C	MRPL38	P35996	138 aa	Predicted RBP	0.42	□□□□□ -2.34
SLU7	YDR088C	VMA21	P41806	77 aa		0.42	□□□□□ -2.34
SLU7	YDR088C	IMP2	P46972	177 aa		0.42	□□□□□ -2.34
SLU7	YDR088C	YOL118C	Q08259	102 aa		0.42	□□□□□ -2.34
SLU7	YDR088C	YDR029W	Q12111	104 aa		0.42	□□□□□ -2.34
SLU7	YDR088C	YGL041C-B	Q3E750	60 aa		0.42	□□□□□ -2.34
SLU7	YDR088C	YPL038W-A	Q3E7B4	63 aa		0.42	□□□□□ -2.34
SLU7	YDR088C	PDR10	P51533	1564 aa		0.41	□□□□□ -2.34
SLU7	YDR088C	NHP2	P32495	156 aa	Predicted RBP	0.41	□□□□□ -2.34
SLU7	YDR088C	MSL1	P40567	111 aa	Predicted RBP	0.41	□□□□□ -2.34
SLU7	YDR088C	ICS3	P47034	131 aa		0.41	□□□□□ -2.34
SLU7	YDR088C	SNA2	P56508	79 aa		0.41	□□□□□ -2.34
SLU7	YDR088C	MIX14	Q04341	121 aa		0.41	□□□□□ -2.34
SLU7	YDR088C	REV3	P14284	1504 aa		0.41	□□□□□ -2.34
SLU7	YDR088C	RSF2	P46974	1380 aa		0.41	□□□□□ -2.34
SLU7	YDR088C	POL2	P21951	2222 aa	Known RBP	0.41	□□□□□ -2.34
SLU7	YDR088C	POL1	P13382	1468 aa		0.41	□□□□□ -2.34
SLU7	YDR088C	TY4B-H	P0C2J7	1802 aa		0.41	□□□□□ -2.34
SLU7	YDR088C	GEA1	P47102	1408 aa	Predicted RBP	0.4	□□□□□ -2.34
SLU7	YDR088C	RPA12	P32529	125 aa	Known RBP	0.4	□□□□□ -2.35
SLU7	YDR088C	SRB6	P32570	121 aa		0.4	□□□□□ -2.35
SLU7	YDR088C	YHR173C	P38864	112 aa		0.4	□□□□□ -2.35
SLU7	YDR088C	MRX7	P53869	86 aa		0.4	□□□□□ -2.35
SLU7	YDR088C	YDR042C	Q03205	200 aa		0.4	□□□□□ -2.35
SLU7	YDR088C	ICY1	Q04329	127 aa		0.4	□□□□□ -2.35
SLU7	YDR088C	GEA2	P39993	1459 aa	Known RBP	0.4	□□□□□ -2.35
SLU7	YDR088C	ESC1	Q03661	1658 aa	Known RBP	0.4	□□□□□ -2.35
SLU7	YDR088C	ECM29	P38737	1868 aa		0.39	□□□□□ -2.35
SLU7	YDR088C	PAU1	P0CE88	120 aa		0.39	□□□□□ -2.35
SLU7	YDR088C	PAU14	P0CE89	120 aa		0.39	□□□□□ -2.35
SLU7	YDR088C	SHU1	P38751	150 aa		0.39	□□□□□ -2.35
SLU7	YDR088C	SNU13	P39990	126 aa	Known RBP	0.39	□□□□□ -2.35
SLU7	YDR088C	CWP2	P43497	92 aa		0.39	□□□□□ -2.35
SLU7	YDR088C	YMR082C	Q04276	118 aa		0.39	□□□□□ -2.35
SLU7	YDR088C	SWC7	Q06707	132 aa		0.39	□□□□□ -2.35
SLU7	YDR088C	PAU20	Q08322	120 aa		0.39	□□□□□ -2.35
SLU7	YDR088C	YSP2	Q06681	1438 aa		0.38	□□□□□ -2.35
SLU7	YDR088C	RPS11A	P0CX47	156 aa	Known RBP	0.38	□□□□□ -2.35
SLU7	YDR088C	RPS11B	P0CX48	156 aa	Known RBP	0.38	□□□□□ -2.35
SLU7	YDR088C	RSM18	P40033	138 aa		0.38	□□□□□ -2.35
SLU7	YDR088C	YIL086C	P40503	102 aa		0.38	□□□□□ -2.35
SLU7	YDR088C	YCL048W-A	Q2V2Q2	79 aa		0.38	□□□□□ -2.35
SLU7	YDR088C	YOL164W-A	Q3E7A5	60 aa		0.38	□□□□□ -2.35
SLU7	YDR088C	GDB1	Q06625	1536 aa		0.38	□□□□□ -2.35
SLU7	YDR088C	SKI3	P17883	1432 aa	Known RBP	0.38	□□□□□ -2.35
SLU7	YDR088C	SRB8	P25648	1427 aa		0.38	□□□□□ -2.35
SLU7	YDR088C	CAT8	P39113	1433 aa		0.38	□□□□□ -2.35
SLU7	YDR088C	BPT1	P14772	1559 aa		0.37	□□□□□ -2.35
SLU7	YDR088C	YHL005C	P38752	130 aa		0.37	□□□□□ -2.35
SLU7	YDR088C	MPC2	P38857	129 aa		0.37	□□□□□ -2.35
SLU7	YDR088C	RPC10	P40422	70 aa		0.37	□□□□□ -2.35
SLU7	YDR088C	YPR145C-A	Q2V2P0	78 aa		0.37	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms