RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W PAU14P0CE89 120 aa1.45□□□□□ -2.18
VPS41YDR080W PAU6P0CE90 120 aa1.45□□□□□ -2.18
VPS41YDR080W PAU18P0CE91 120 aa1.45□□□□□ -2.18
VPS41YDR080W PAU8P0CE92 120 aa1.45□□□□□ -2.18
VPS41YDR080W PAU11P0CE93 120 aa1.45□□□□□ -2.18
VPS41YDR080W UBC4P15731 148 aa1.45□□□□□ -2.18
VPS41YDR080W QRI5P32344 111 aa1.45□□□□□ -2.18
VPS41YDR080W PAU13P38725 120 aa1.45□□□□□ -2.18
VPS41YDR080W VMA7P39111 118 aa1.45□□□□□ -2.18
VPS41YDR080W YGL193CP53097 103 aa1.45□□□□□ -2.18
VPS41YDR080W PAU10Q03050 120 aa1.45□□□□□ -2.18
VPS41YDR080W YDR042CQ03205 200 aa1.45□□□□□ -2.18
VPS41YDR080W PAU20Q08322 120 aa1.45□□□□□ -2.18
VPS41YDR080W PAU9Q3E770 120 aa1.45□□□□□ -2.18
VPS41YDR080W FZF1P32805 299 aa1.45□□□□□ -2.18
VPS41YDR080W PAU7P39545 55 aa1.45□□□□□ -2.18
VPS41YDR080W EDC2P40023 145 aaPredicted RBP1.45□□□□□ -2.18
VPS41YDR080W PAU5P43575 122 aa1.45□□□□□ -2.18
VPS41YDR080W GTO3Q04806 366 aa1.45□□□□□ -2.18
VPS41YDR080W KSH1Q8TGJ3 72 aa1.45□□□□□ -2.18
VPS41YDR080W YKR070WP36151 352 aaKnown RBP1.44□□□□□ -2.18
VPS41YDR080W YJR111CP47148 283 aaKnown RBP1.44□□□□□ -2.18
VPS41YDR080W KNH1P50112 268 aa1.44□□□□□ -2.18
VPS41YDR080W PLP1Q04004 230 aa1.44□□□□□ -2.18
VPS41YDR080W YOR268CQ08734 132 aa1.44□□□□□ -2.18
VPS41YDR080W YAL065CO13511 128 aa1.44□□□□□ -2.18
VPS41YDR080W HMRA1P0CY11 126 aa1.44□□□□□ -2.18
VPS41YDR080W RPB11P38902 120 aa1.44□□□□□ -2.18
VPS41YDR080W GCV3P39726 170 aaPredicted RBP1.44□□□□□ -2.18
VPS41YDR080W CSM4Q08955 156 aa1.44□□□□□ -2.18
VPS41YDR080W SME1Q12330 94 aaPredicted RBP1.44□□□□□ -2.18
VPS41YDR080W MAG1P22134 296 aaKnown RBP1.44□□□□□ -2.18
VPS41YDR080W APS1P35181 156 aa1.44□□□□□ -2.18
VPS41YDR080W CWP2P43497 92 aa1.44□□□□□ -2.18
VPS41YDR080W POM33Q12164 279 aa1.44□□□□□ -2.18
VPS41YDR080W YOR015WQ12169 119 aa1.44□□□□□ -2.18
VPS41YDR080W YAL067W-AQ8TGK6 75 aa1.44□□□□□ -2.18
VPS41YDR080W ZRT1P32804 376 aa1.43□□□□□ -2.18
VPS41YDR080W HUA1P40325 198 aa1.43□□□□□ -2.18
VPS41YDR080W YBL039W-BP0C268 59 aa1.43□□□□□ -2.18
VPS41YDR080W AQY2P0CD90 149 aa1.43□□□□□ -2.18
VPS41YDR080W RPL23AP0CX41 137 aaKnown RBP1.43□□□□□ -2.18
VPS41YDR080W RPL23BP0CX42 137 aaKnown RBP1.43□□□□□ -2.18
VPS41YDR080W YBR219CP38317 127 aa1.43□□□□□ -2.18
VPS41YDR080W SRP14P38985 146 aa1.43□□□□□ -2.18
VPS41YDR080W KTI11Q3E840 82 aa1.43□□□□□ -2.18
VPS41YDR080W PFY1P07274 126 aa1.42□□□□□ -2.18
VPS41YDR080W PAU19P0CE85 124 aa1.42□□□□□ -2.18
VPS41YDR080W PAU21P0CE86 164 aa1.42□□□□□ -2.18
VPS41YDR080W PAU22P0CE87 164 aa1.42□□□□□ -2.18
VPS41YDR080W PAU3P25610 124 aa1.42□□□□□ -2.18
VPS41YDR080W PAU15P40585 124 aa1.42□□□□□ -2.18
VPS41YDR080W THG1P53215 237 aaKnown RBP1.42□□□□□ -2.18
VPS41YDR080W EOS1P53938 366 aa1.42□□□□□ -2.18
VPS41YDR080W YGR121W-AQ3E816 71 aa1.42□□□□□ -2.18
VPS41YDR080W Q0032Q9ZZX7 96 aa1.42□□□□□ -2.18
VPS41YDR080W YEL008WP40001 126 aa1.42□□□□□ -2.18
VPS41YDR080W YKL023C-AQ2V2P3 75 aa1.42□□□□□ -2.18
VPS41YDR080W AIM29P36154 155 aa1.41□□□□□ -2.18
VPS41YDR080W MGR2Q02889 113 aa1.41□□□□□ -2.18
VPS41YDR080W PKR1Q03880 122 aaKnown RBP1.41□□□□□ -2.18
VPS41YDR080W SMT3Q12306 101 aaKnown RBP1.41□□□□□ -2.18
VPS41YDR080W YCL001W-BQ96VH2 84 aa1.41□□□□□ -2.18
VPS41YDR080W YKL070WP36087 169 aa1.41□□□□□ -2.18
VPS41YDR080W PHS1P40857 217 aa1.41□□□□□ -2.18
VPS41YDR080W TOS6P48560 102 aa1.41□□□□□ -2.18
VPS41YDR080W YMR295CQ03559 197 aa1.41□□□□□ -2.18
VPS41YDR080W ADH3P07246 375 aaKnown RBP1.41□□□□□ -2.18
VPS41YDR080W COX10P21592 462 aa1.41□□□□□ -2.18
VPS41YDR080W SCM4P32564 187 aa1.41□□□□□ -2.18
VPS41YDR080W YBR209WP38311 105 aa1.41□□□□□ -2.18
VPS41YDR080W TAD2P47058 250 aa1.41□□□□□ -2.18
VPS41YDR080W YAL063C-AQ3E791 96 aa1.41□□□□□ -2.18
VPS41YDR080W PAU16P35994 123 aa1.4□□□□□ -2.19
VPS41YDR080W HAP3P13434 144 aa1.4□□□□□ -2.19
VPS41YDR080W MRPL24P36525 258 aaPredicted RBP1.4□□□□□ -2.19
VPS41YDR080W YNL190WP53872 204 aa1.4□□□□□ -2.19
VPS41YDR080W DCN1Q12395 269 aa1.4□□□□□ -2.19
VPS41YDR080W YOR008C-AQ3E7B9 74 aa1.4□□□□□ -2.19
VPS41YDR080W YBR090CP38253 122 aa1.39□□□□□ -2.19
VPS41YDR080W POR1P04840 283 aaKnown RBP1.39□□□□□ -2.19
VPS41YDR080W RPL29P05747 59 aaPredicted RBP1.39□□□□□ -2.19
VPS41YDR080W LDS1P31379 325 aa1.38□□□□□ -2.19
VPS41YDR080W HSP10P38910 106 aa1.38□□□□□ -2.19
VPS41YDR080W YER085CP40058 173 aa1.38□□□□□ -2.19
VPS41YDR080W MVB12P42939 101 aa1.38□□□□□ -2.19
VPS41YDR080W FMP49A0A023PZB3 126 aa1.38□□□□□ -2.19
VPS41YDR080W MBF1O14467 151 aaKnown RBP1.38□□□□□ -2.19
VPS41YDR080W YKR032WP36127 104 aa1.38□□□□□ -2.19
VPS41YDR080W YGL088WP53151 121 aa1.38□□□□□ -2.19
VPS41YDR080W ABF2Q02486 183 aa1.38□□□□□ -2.19
VPS41YDR080W COA3Q3E7B2 85 aa1.38□□□□□ -2.19
VPS41YDR080W KRE1P17260 313 aa1.38□□□□□ -2.19
VPS41YDR080W CNB1P25296 175 aa1.38□□□□□ -2.19
VPS41YDR080W DAD3P69850 94 aa1.38□□□□□ -2.19
VPS41YDR080W ECM19Q06011 112 aa1.38□□□□□ -2.19
VPS41YDR080W YHL018WP38744 120 aaPredicted RBP1.37□□□□□ -2.19
VPS41YDR080W YNL122CP53921 115 aaPredicted RBP1.37□□□□□ -2.19
VPS41YDR080W FSF1Q12029 327 aaKnown RBP1.37□□□□□ -2.19
VPS41YDR080W PET8P38921 284 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms