RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W YBR209WP38311 105 aa3.44□□□□□ -1.86
SSB1YDL229W RSM18P40033 138 aa3.44□□□□□ -1.86
SSB1YDL229W YGR018CP53211 109 aa3.44□□□□□ -1.86
SSB1YDL229W YMR181CQ03231 154 aa3.44□□□□□ -1.86
SSB1YDL229W IRC23Q08416 157 aa3.44□□□□□ -1.86
SSB1YDL229W YDR246W-AQ3E763 66 aa3.44□□□□□ -1.86
SSB1YDL229W PFY1P07274 126 aa3.43□□□□□ -1.86
SSB1YDL229W RPS22AP0C0W1 130 aaKnown RBP3.43□□□□□ -1.86
SSB1YDL229W YHR214C-DP0CX93 97 aa3.43□□□□□ -1.86
SSB1YDL229W YSY6P38374 65 aa3.43□□□□□ -1.86
SSB1YDL229W WWM1P43582 211 aaKnown RBP3.43□□□□□ -1.86
SSB1YDL229W PCP1P53259 346 aa3.43□□□□□ -1.86
SSB1YDL229W YLR012CQ07927 99 aa3.43□□□□□ -1.86
SSB1YDL229W VPS13Q07878 3144 aa3.42□□□□□ -1.86
SSB1YDL229W DSS4P32601 143 aa3.42□□□□□ -1.86
SSB1YDL229W YEL067CP39978 195 aa3.42□□□□□ -1.86
SSB1YDL229W HHF1P02309 103 aaKnown RBP3.42□□□□□ -1.86
SSB1YDL229W RPL26AP05743 127 aaKnown RBP3.42□□□□□ -1.86
SSB1YDL229W RPL23AP0CX41 137 aaKnown RBP3.42□□□□□ -1.86
SSB1YDL229W RPL23BP0CX42 137 aaKnown RBP3.42□□□□□ -1.86
SSB1YDL229W ROX3P25046 220 aa3.42□□□□□ -1.86
SSB1YDL229W YHR173CP38864 112 aa3.42□□□□□ -1.86
SSB1YDL229W YER135CP40082 130 aa3.42□□□□□ -1.86
SSB1YDL229W PBA1Q05778 276 aa3.42□□□□□ -1.86
SSB1YDL229W YFL051CP43552 160 aa3.41□□□□□ -1.86
SSB1YDL229W HUR1P45820 110 aa3.41□□□□□ -1.86
SSB1YDL229W PPT2Q12036 173 aa3.41□□□□□ -1.86
SSB1YDL229W YOR192C-CQ3E736 78 aa3.41□□□□□ -1.86
SSB1YDL229W YPR096CO13587 100 aa3.4□□□□□ -1.86
SSB1YDL229W YHR180WP38868 163 aa3.4□□□□□ -1.86
SSB1YDL229W YNR077CP53758 84 aa3.4□□□□□ -1.86
SSB1YDL229W YOR381W-AQ3E804 55 aa3.4□□□□□ -1.86
SSB1YDL229W YAL064W-BO13512 126 aa3.4□□□□□ -1.87
SSB1YDL229W RPL32P38061 130 aaKnown RBP3.4□□□□□ -1.87
SSB1YDL229W ERI1P62651 68 aaKnown RBP3.4□□□□□ -1.87
SSB1YDL229W YMR007WQ03675 126 aa3.4□□□□□ -1.87
SSB1YDL229W YFR032C-BQ8TGU2 87 aa3.4□□□□□ -1.87
SSB1YDL229W RPS8AP0CX39 200 aaKnown RBP3.39□□□□□ -1.87
SSB1YDL229W RPS8BP0CX40 200 aaKnown RBP3.39□□□□□ -1.87
SSB1YDL229W FUN19P28003 413 aaPredicted RBP3.39□□□□□ -1.87
SSB1YDL229W PET8P38921 284 aa3.39□□□□□ -1.87
SSB1YDL229W FYV5P25585 152 aa3.38□□□□□ -1.87
SSB1YDL229W MRPL39P36533 70 aa3.38□□□□□ -1.87
SSB1YDL229W YPI1P43587 155 aa3.38□□□□□ -1.87
SSB1YDL229W ECO1P43605 281 aa3.38□□□□□ -1.87
SSB1YDL229W IMP2P46972 177 aa3.38□□□□□ -1.87
SSB1YDL229W CRC1Q12289 327 aa3.38□□□□□ -1.87
SSB1YDL229W YPR053CQ6Q5F3 151 aa3.38□□□□□ -1.87
SSB1YDL229W AIM4P38305 123 aaPredicted RBP3.37□□□□□ -1.87
SSB1YDL229W YGR269WP40326 108 aa3.37□□□□□ -1.87
SSB1YDL229W YML122CQ03207 126 aa3.37□□□□□ -1.87
SSB1YDL229W YGR121W-AQ3E816 71 aa3.37□□□□□ -1.87
SSB1YDL229W YDL022C-AP0C5L6 82 aa3.37□□□□□ -1.87
SSB1YDL229W ERG2P32352 222 aa3.37□□□□□ -1.87
SSB1YDL229W SRX1P36077 127 aa3.37□□□□□ -1.87
SSB1YDL229W SAP30P38429 201 aa3.37□□□□□ -1.87
SSB1YDL229W SPG1P50088 95 aa3.37□□□□□ -1.87
SSB1YDL229W YHP1Q04116 353 aa3.37□□□□□ -1.87
SSB1YDL229W YAL065CO13511 128 aa3.36□□□□□ -1.87
SSB1YDL229W QCR9P22289 66 aa3.36□□□□□ -1.87
SSB1YDL229W VTC1P40046 129 aaRIP-Chip data3.36□□□□□ -1.87not detected
SSB1YDL229W YOL014WQ08110 124 aa3.36□□□□□ -1.87
SSB1YDL229W FYV12Q08559 129 aa3.36□□□□□ -1.87
SSB1YDL229W PCL5P38794 229 aa3.35□□□□□ -1.87
SSB1YDL229W NCA3P46955 337 aa3.35□□□□□ -1.87
SSB1YDL229W EDC1P53080 175 aaPredicted RBP3.35□□□□□ -1.87
SSB1YDL229W YOR343CQ12484 108 aa3.35□□□□□ -1.87
SSB1YDL229W YHL005CP38752 130 aa3.35□□□□□ -1.87
SSB1YDL229W CTR2P38865 189 aa3.35□□□□□ -1.87
SSB1YDL229W RPS14BP39516 138 aaKnown RBP3.35□□□□□ -1.87
SSB1YDL229W SPI1P40092 148 aa3.35□□□□□ -1.87
SSB1YDL229W AIM19P40502 157 aa3.35□□□□□ -1.87
SSB1YDL229W YGR045CP53229 120 aa3.35□□□□□ -1.87
SSB1YDL229W FHN1P53279 174 aa3.35□□□□□ -1.87
SSB1YDL229W SED1Q01589 338 aa3.35□□□□□ -1.87
SSB1YDL229W YMR321CQ04898 105 aa3.35□□□□□ -1.87
SSB1YDL229W YLR162WQ06235 118 aa3.35□□□□□ -1.87
SSB1YDL229W TIM22Q12328 207 aa3.35□□□□□ -1.87
SSB1YDL229W YOR314WQ12506 109 aa3.35□□□□□ -1.87
SSB1YDL229W AGA1P32323 725 aa3.34□□□□□ -1.87
SSB1YDL229W MTC6P38849 526 aa3.34□□□□□ -1.87
SSB1YDL229W MIG3P39943 394 aa3.34□□□□□ -1.87
SSB1YDL229W HUA1P40325 198 aa3.34□□□□□ -1.87
SSB1YDL229W YDR461C-AQ2V2P7 80 aa3.33□□□□□ -1.88
SSB1YDL229W FLO9P39712 1322 aa3.33□□□□□ -1.88
SSB1YDL229W YNL208WP40159 199 aaKnown RBP3.33□□□□□ -1.88
SSB1YDL229W YOL118CQ08259 102 aa3.33□□□□□ -1.88
SSB1YDL229W VPS68Q12016 184 aa3.33□□□□□ -1.88
SSB1YDL229W ATP20Q12233 115 aa3.33□□□□□ -1.88
SSB1YDL229W YLR285C-AQ3E771 56 aa3.33□□□□□ -1.88
SSB1YDL229W YER188C-AP0C0V2 99 aa3.32□□□□□ -1.88
SSB1YDL229W QCR10P37299 77 aa3.32□□□□□ -1.88
SSB1YDL229W MPC2P38857 129 aa3.32□□□□□ -1.88
SSB1YDL229W API2Q04413 109 aa3.32□□□□□ -1.88
SSB1YDL229W YPR011CQ12251 326 aa3.32□□□□□ -1.88
SSB1YDL229W YLR156WP0CE96 114 aa3.31□□□□□ -1.88
SSB1YDL229W YLR159WP0CE97 114 aa3.31□□□□□ -1.88
SSB1YDL229W YLR161WP0CE98 114 aa3.31□□□□□ -1.88
SSB1YDL229W YHR022CP38763 256 aa3.31□□□□□ -1.88
SSB1YDL229W RPL26BP53221 127 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 225.3 ms