RNA–Protein interactions for RNA: YDL127W

PCL2, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeastyeast

Gene PCL2, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCL2YDL127W CCW14O13547 238 aa0.97□□□□□ -2.25
PCL2YDL127W RPS12P48589 143 aaKnown RBP0.97□□□□□ -2.25
PCL2YDL127W YOS1Q3E834 85 aa0.97□□□□□ -2.25
PCL2YDL127W SNF2P22082 1703 aa0.97□□□□□ -2.25
PCL2YDL127W TY4B-HP0C2J7 1802 aa0.96□□□□□ -2.26
PCL2YDL127W YCR101CP25607 182 aa0.96□□□□□ -2.26
PCL2YDL127W SRB6P32570 121 aa0.96□□□□□ -2.26
PCL2YDL127W YHR173CP38864 112 aa0.96□□□□□ -2.26
PCL2YDL127W BLM10P43583 2143 aa0.96□□□□□ -2.26
PCL2YDL127W YDR010CQ12426 110 aa0.96□□□□□ -2.26
PCL2YDL127W GCV3P39726 170 aaPredicted RBP0.95□□□□□ -2.26
PCL2YDL127W YBR072C-AQ3E794 53 aa0.95□□□□□ -2.26
PCL2YDL127W YIL086CP40503 102 aa0.94□□□□□ -2.26
PCL2YDL127W TSC11P40061 1430 aa0.93□□□□□ -2.26
PCL2YDL127W UBC4P15731 148 aa0.93□□□□□ -2.26
PCL2YDL127W SHU1P38751 150 aa0.93□□□□□ -2.26
PCL2YDL127W YDR210WQ03482 75 aa0.93□□□□□ -2.26
PCL2YDL127W YMR090WQ04304 227 aaKnown RBP0.93□□□□□ -2.26
PCL2YDL127W YPL038W-AQ3E7B4 63 aa0.93□□□□□ -2.26
PCL2YDL127W TOP2P06786 1428 aaKnown RBP0.92□□□□□ -2.26
PCL2YDL127W KRE5P22023 1365 aa0.92□□□□□ -2.26
PCL2YDL127W RGI1P40043 161 aaPredicted RBP0.91□□□□□ -2.26
PCL2YDL127W UBC5P15732 148 aa0.9□□□□□ -2.27
PCL2YDL127W YBR090CP38253 122 aa0.9□□□□□ -2.27
PCL2YDL127W YOL164W-AQ3E7A5 60 aa0.9□□□□□ -2.27
PCL2YDL127W MDS3P53094 1487 aa0.9□□□□□ -2.27
PCL2YDL127W YCR095W-AQ3E787 52 aa0.89□□□□□ -2.27
PCL2YDL127W MPC2P38857 129 aa0.88□□□□□ -2.27
PCL2YDL127W COX19Q3E731 98 aa0.88□□□□□ -2.27
PCL2YDL127W RPS29BP41058 56 aaKnown RBP0.87□□□□□ -2.27
PCL2YDL127W COX12Q01519 83 aa0.87□□□□□ -2.27
PCL2YDL127W PAU5P43575 122 aa0.86□□□□□ -2.27
PCL2YDL127W POL2P21951 2222 aaKnown RBP0.86□□□□□ -2.27
PCL2YDL127W TY3B-IQ7LHG5 1498 aaKnown RBP0.86□□□□□ -2.27
PCL2YDL127W SNA2P56508 79 aa0.85□□□□□ -2.27
PCL2YDL127W FAS2P19097 1887 aaKnown RBP0.84□□□□□ -2.27
PCL2YDL127W RSM19P53733 91 aaPredicted RBP0.84□□□□□ -2.27
PCL2YDL127W MIX14Q04341 121 aa0.84□□□□□ -2.27
PCL2YDL127W MRX7P53869 86 aa0.83□□□□□ -2.28
PCL2YDL127W SRB8P25648 1427 aa0.82□□□□□ -2.28
PCL2YDL127W PDR11P40550 1411 aa0.82□□□□□ -2.28
PCL2YDL127W GEA1P47102 1408 aaPredicted RBP0.82□□□□□ -2.28
PCL2YDL127W PAU6P0CE90 120 aa0.82□□□□□ -2.28
PCL2YDL127W PAU18P0CE91 120 aa0.82□□□□□ -2.28
PCL2YDL127W KSH1Q8TGJ3 72 aa0.82□□□□□ -2.28
PCL2YDL127W MYO1P08964 1928 aa0.81□□□□□ -2.28
PCL2YDL127W ROX3P25046 220 aa0.81□□□□□ -2.28
PCL2YDL127W RPS11AP0CX47 156 aaKnown RBP0.8□□□□□ -2.28
PCL2YDL127W RPS11BP0CX48 156 aaKnown RBP0.8□□□□□ -2.28
PCL2YDL127W RPA12P32529 125 aaKnown RBP0.8□□□□□ -2.28
PCL2YDL127W ICY1Q04329 127 aa0.8□□□□□ -2.28
PCL2YDL127W FYV7Q12247 151 aa0.8□□□□□ -2.28
PCL2YDL127W BPT1P14772 1559 aa0.79□□□□□ -2.28
PCL2YDL127W MRPL38P35996 138 aaPredicted RBP0.79□□□□□ -2.28
PCL2YDL127W YNR034W-AQ3E841 98 aa0.78□□□□□ -2.28
PCL2YDL127W MRP17P28778 131 aa0.77□□□□□ -2.29
PCL2YDL127W YBL071CP38185 102 aa0.77□□□□□ -2.29
PCL2YDL127W YOR289WQ12012 251 aaPredicted RBP0.77□□□□□ -2.29
PCL2YDL127W SSN2P38931 1420 aa0.77□□□□□ -2.29
PCL2YDL127W PAU20Q08322 120 aa0.76□□□□□ -2.29
PCL2YDL127W GEA2P39993 1459 aaKnown RBP0.75□□□□□ -2.29
PCL2YDL127W BUD4P47136 1447 aa0.75□□□□□ -2.29
PCL2YDL127W HMRA1P0CY11 126 aa0.75□□□□□ -2.29
PCL2YDL127W YHL005CP38752 130 aa0.75□□□□□ -2.29
PCL2YDL127W YBR292CP38357 123 aa0.74□□□□□ -2.29
PCL2YDL127W REV3P14284 1504 aa0.73□□□□□ -2.29
PCL2YDL127W YRF1-1P0CX20 1796 aa0.73□□□□□ -2.29
PCL2YDL127W YRF1-5P0CX21 1796 aa0.73□□□□□ -2.29
PCL2YDL127W YRF1-8P0CX22 1796 aa0.73□□□□□ -2.29
PCL2YDL127W NTE1Q04958 1679 aa0.72□□□□□ -2.29
PCL2YDL127W AIM19P40502 157 aa0.72□□□□□ -2.29
PCL2YDL127W EMC5P40540 141 aa0.72□□□□□ -2.29
PCL2YDL127W RIM15P43565 1770 aa0.72□□□□□ -2.29
PCL2YDL127W PAU1P0CE88 120 aa0.71□□□□□ -2.3
PCL2YDL127W PAU14P0CE89 120 aa0.71□□□□□ -2.3
PCL2YDL127W PAU8P0CE92 120 aa0.71□□□□□ -2.3
PCL2YDL127W PAU11P0CE93 120 aa0.71□□□□□ -2.3
PCL2YDL127W PAU13P38725 120 aa0.71□□□□□ -2.3
PCL2YDL127W RSM18P40033 138 aa0.71□□□□□ -2.3
PCL2YDL127W PAU10Q03050 120 aa0.71□□□□□ -2.3
PCL2YDL127W NHP10Q03435 203 aa0.71□□□□□ -2.3
PCL2YDL127W PAU9Q3E770 120 aa0.71□□□□□ -2.3
PCL2YDL127W RRT15Q3E811 62 aa0.71□□□□□ -2.3
PCL2YDL127W SPC1P46965 94 aa0.7□□□□□ -2.3
PCL2YDL127W YNL190WP53872 204 aa0.7□□□□□ -2.3
PCL2YDL127W CAT8P39113 1433 aa0.69□□□□□ -2.3
PCL2YDL127W RPC10P40422 70 aa0.67□□□□□ -2.3
PCL2YDL127W PAU4P53427 120 aa0.67□□□□□ -2.3
PCL2YDL127W YRF1-2P40105 1681 aa0.67□□□□□ -2.3
PCL2YDL127W RSF2P46974 1380 aa0.67□□□□□ -2.3
PCL2YDL127W TY1B-BLQ12490 1755 aa0.66□□□□□ -2.3
PCL2YDL127W ZEO1Q08245 113 aa0.66□□□□□ -2.3
PCL2YDL127W YNL198CP40166 100 aa0.64□□□□□ -2.31
PCL2YDL127W MSL1P40567 111 aaPredicted RBP0.64□□□□□ -2.31
PCL2YDL127W YPL225WQ08971 146 aaKnown RBP0.63□□□□□ -2.31
PCL2YDL127W SNU13P39990 126 aaKnown RBP0.61□□□□□ -2.31
PCL2YDL127W RPA190P10964 1664 aaKnown RBP0.59□□□□□ -2.31
PCL2YDL127W TAO3P40468 2376 aa0.59□□□□□ -2.31
PCL2YDL127W SUS1Q6WNK7 96 aa0.58□□□□□ -2.32
PCL2YDL127W YNL042W-BQ3E7Z2 85 aa0.57□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms