RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 CPXM1Q96SM3 734 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 SYNCQ9H7C4 482 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 RNF216Q9NWF9 866 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-221ENST00000641573 TJP2Q9UDY2 1190 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 FAM50BQ9Y247 325 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 ARHGEF37A1IGU5 675 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 LCHNA4D1U4 455 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 F8W810 466 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 TMEM189-UBE2V1I3L0A0 370 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 MYO1FO00160 1098 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 KCNK3O14649 394 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 CTIFO43310 598 aaKnown RBP13.82□□□□□ -0.2
PHGDH-221ENST00000641573 ATP2C2O75185 946 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 GJB6O95452 261 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 ERBB2P04626 1255 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 CYP11A1P05108 521 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 ITGB1P05556 798 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 GABRB2P47870 512 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 OR1G1P47890 313 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 IKBKEQ14164 716 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 ZNF268Q14587 947 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-221ENST00000641573 KIAA0319Q5VV43 1072 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
PHGDH-221ENST00000641573 XYLT1Q86Y38 959 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 CREG2Q8IUH2 290 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 CRIPAKQ8N1N5 446 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 ANKRD52Q8NB46 1076 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 C3orf20Q8ND61 904 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 SLC2A14Q8TDB8 520 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 IPO4Q8TEX9 1081 aaKnown RBP13.82□□□□□ -0.2
PHGDH-221ENST00000641573 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 PBKQ96KB5 322 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 SUSD3Q96L08 255 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 HNRNPABQ99729 332 aaKnown RBP13.82□□□□□ -0.2
PHGDH-221ENST00000641573 SYT15Q9BQS2 421 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 TRIM7Q9C029 511 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 WDR35Q9P2L0 1181 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 DNAJB4Q9UDY4 337 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 DSEQ9UL01 958 aa13.82□□□□□ -0.2
PHGDH-221ENST00000641573 TDRD15B5MCY1 1934 aaKnown RBP13.82□□□□□ -0.2
PHGDH-221ENST00000641573 WDFY4Q6ZS81 3184 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 CTAGE15A4D2H0 777 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 GRXCR2A6NFK2 248 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 TMEM191CA6NGB0 347 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 TBKBP1A7MCY6 615 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 MIF4GDA9UHW6 222 aaKnown RBP13.81□□□□□ -0.2
PHGDH-221ENST00000641573 GOLGA8SH3BPF8 625 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 CES2O00748 559 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 DDX3YO15523 660 aaKnown RBP13.81□□□□□ -0.2
PHGDH-221ENST00000641573 SPOPO43791 374 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 TADA3O75528 432 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 PROSCO94903 275 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 CTAGE8P0CG41 777 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 TYMPP19971 482 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 TKTP29401 623 aaKnown RBP13.81□□□□□ -0.2
PHGDH-221ENST00000641573 RGS7P49802 495 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 BCAT1P54687 386 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 GSCP56915 257 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-221ENST00000641573 WDR5P61964 334 aaKnown RBP13.81□□□□□ -0.2
PHGDH-221ENST00000641573 PDE4CQ08493 712 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 BST2Q10589 180 aaKnown RBP13.81□□□□□ -0.2
PHGDH-221ENST00000641573 MDH1BQ5I0G3 518 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 PPP1R15BQ5SWA1 713 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 DCUN1D2Q6PH85 259 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 CTAGE6Q86UF2 777 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 CPNE8Q86YQ8 564 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 CTAGE4Q8IX94 777 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 SLC35F5Q8WV83 523 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 RTP3Q9BQQ7 232 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 SELENOOQ9BVL4 669 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 SLC4A5Q9BY07 1137 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 MRPL9Q9BYD2 267 aaKnown RBP13.81□□□□□ -0.2
PHGDH-221ENST00000641573 MIS12Q9H081 205 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 NRDE2Q9H7Z3 1164 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 CRTAC1Q9NQ79 661 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 ST7Q9NRC1 585 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 CDH9Q9ULB4 789 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
PHGDH-221ENST00000641573 PRG3Q9Y2Y8 225 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-221ENST00000641573 MYH10P35580 1976 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 SIGLEC16A6NMB1 481 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 EFCAB8A8MWE9 144 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 E5RJQ4 531 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 TULP2O00295 520 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 PDE2AO00408 941 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-221ENST00000641573 CTNNA2P26232 953 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 PCSK1P29120 753 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 SLC1A1P43005 524 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 PAFAH1B1P43034 410 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 SNX16P57768 344 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 RPL7AP62424 266 aaKnown RBP13.8□□□□□ -0.2
PHGDH-221ENST00000641573 CCDC142Q17RM4 750 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 CCDC181Q5TID7 509 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 OR6B2Q6IFH4 312 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 PMF1Q6P1K2 205 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 FUKQ8N0W3 1084 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 THEM5Q8N1Q8 247 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 UBL4BQ8N7F7 174 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 STK32AQ8WU08 396 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 CD101Q93033 1021 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms