RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 MYBL1P10243 752 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 LCP1P13796 627 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 PLA2G4AP47712 749 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 RGS7P49802 495 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 CLCN4P51793 760 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 NAP1L1P55209 391 aaKnown RBP13.66□□□□□ -0.22
PHGDH-220ENST00000641570 GFPT1Q06210 699 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-220ENST00000641570 PDE4CQ08493 712 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 PDCLQ13371 301 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 ALKBH5Q6P6C2 394 aaKnown RBP13.66□□□□□ -0.22
PHGDH-220ENST00000641570 RSPO2Q6UXX9 243 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-220ENST00000641570 CLEC20AQ6ZU45 233 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 SPATA31D4Q6ZUB0 917 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 DENND5BQ6ZUT9 1274 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 TCEAL8Q8IYN2 117 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 NUP93Q8N1F7 819 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 ARHGAP18Q8N392 663 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 CPA5Q8WXQ8 436 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 HSFY1Q96LI6 401 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 SLITRK1Q96PX8 696 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 SFXN1Q9H9B4 322 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 CYLDQ9NQC7 956 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 ARHGAP20Q9P2F6 1191 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 WDR35Q9P2L0 1181 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 FBXW11Q9UKB1 542 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 ASB3Q9Y575 518 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 PCDHGC5Q9Y5F6 944 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 INSL5Q9Y5Q6 135 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 SCINQ9Y6U3 715 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 KIAA1671Q9BY89 1806 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 NLRC5Q86WI3 1866 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 LILRB3O75022 631 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 ABLIM3O94929 683 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 NDUFA10O95299 355 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 FGF19O95750 216 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 PLEKP08567 350 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-220ENST00000641570 GZMAP12544 262 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 FOSL2P15408 326 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 GRIN2CQ14957 1233 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 DUSP6Q16828 381 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 DDR2Q16832 855 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 TCEAL5Q5H9L2 206 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 E4F1Q66K89 784 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-220ENST00000641570 HGSNATQ68CP4 663 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 OR6B2Q6IFH4 312 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 ACAD10Q6JQN1 1059 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 DNAJC24Q6P3W2 148 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 WDR59Q6PJI9 974 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 TADA2BQ86TJ2 420 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 PIGZQ86VD9 579 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 TTC30AQ86WT1 665 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 ZDHHC17Q8IUH5 632 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 GIPC2Q8TF65 315 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 STK32AQ8WU08 396 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 ZNF653Q96CK0 615 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 C18orf8Q96DM3 657 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 LRCH3Q96II8 777 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 PKMYT1Q99640 499 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 CHP1Q99653 195 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 C11orf70Q9BRQ4 267 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 SELENOOQ9BVL4 669 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 RHOBTB2Q9BYZ6 727 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 UBXN6Q9BZV1 441 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 NACA2Q9H009 215 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 MRPL47Q9HD33 250 aaKnown RBP13.65□□□□□ -0.22
PHGDH-220ENST00000641570 ASAH2Q9NR71 780 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 SPTLC3Q9NUV7 552 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 COMMD8Q9NX08 183 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 NME7Q9Y5B8 376 aa13.65□□□□□ -0.22
PHGDH-220ENST00000641570 EPN1Q9Y6I3 576 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-220ENST00000641570 EIF3CLB5ME19 914 aaKnown RBP13.64□□□□□ -0.23
PHGDH-220ENST00000641570 CAPN9O14815 690 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 FTLP02792 175 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-220ENST00000641570 CYP1A1P04798 512 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-220ENST00000641570 HNRNPA1P09651 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
PHGDH-220ENST00000641570 H2AFZP0C0S5 128 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 CCDC175P0C221 793 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 ABCB4P21439 1286 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 YWHAQP27348 245 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 MAGEA1P43355 309 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 TKTL1P51854 596 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 SLC5A3P53794 718 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 NOMO3P69849 1222 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 CENPCQ03188 943 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
PHGDH-220ENST00000641570 ADIGQ0VDE8 80 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 CCDC142Q17RM4 750 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 HABP4Q5JVS0 413 aaKnown RBP13.64□□□□□ -0.23
PHGDH-220ENST00000641570 CYP4A22Q5TCH4 519 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 CES5AQ6NT32 575 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 DCUN1D2Q6PH85 259 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 MMS22LQ6ZRQ5 1243 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 H2AFVQ71UI9 128 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 ADGRD2Q7Z7M1 963 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 STKLD1Q8NE28 680 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 PDZD8Q8NEN9 1154 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 DDX1Q92499 740 aaKnown RBP13.64□□□□□ -0.23
PHGDH-220ENST00000641570 FBXO32Q969P5 355 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms