RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 THAP2Q9H0W7 228 aa9.26□□□□□ -0.93
HLA-B-258ENST00000640615 TTYH1Q9H313 450 aaPredicted RBP9.26□□□□□ -0.93
HLA-B-258ENST00000640615 CERS4Q9HA82 394 aa9.26□□□□□ -0.93
HLA-B-258ENST00000640615 ENTPD7Q9NQZ7 604 aa9.26□□□□□ -0.93
HLA-B-258ENST00000640615 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.26□□□□□ -0.93
HLA-B-258ENST00000640615 KCND1Q9NSA2 647 aa9.26□□□□□ -0.93
HLA-B-258ENST00000640615 TRIM10Q9UDY6 481 aa9.26□□□□□ -0.93
HLA-B-258ENST00000640615 CYTH4Q9UIA0 394 aa9.26□□□□□ -0.93
HLA-B-258ENST00000640615 LZTS1Q9Y250 596 aa9.26□□□□□ -0.93
HLA-B-258ENST00000640615 MUC3AQ02505 3323 aa9.26□□□□□ -0.93
HLA-B-258ENST00000640615 CHD9Q3L8U1 2897 aa9.26□□□□□ -0.93
HLA-B-258ENST00000640615 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.25□□□□□ -0.93
HLA-B-258ENST00000640615 MACROD2A1Z1Q3 448 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 MTMR11A4FU01 709 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 GOLGA6L9A6NEM1 432 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 ESPNB1AK53 854 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 GRM6O15303 877 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 PJA2O43164 708 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 ATMINO43313 823 aaPredicted RBP9.25□□□□□ -0.93
HLA-B-258ENST00000640615 KRT86O43790 486 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 LPXNO60711 386 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 LILRB3O75022 631 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 ABL1P00519 1130 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 ERBB2P04626 1255 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 LCP1P13796 627 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 RRM1P23921 792 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 CYP2F1P24903 491 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 DNAJB1P25685 340 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 ARHGAP25P42331 645 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 NOP2P46087 812 aaKnown RBP9.25□□□□□ -0.93
HLA-B-258ENST00000640615 PLA2G4AP47712 749 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 CACNA2D1P54289 1103 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 SNX16P57768 344 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 ERVFC1P60507 584 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 ROR1Q01973 937 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 UBE3AQ05086 875 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 SMARCB1Q12824 385 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 PTP4A2Q12974 167 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 GPM6BQ13491 265 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 SMC1AQ14683 1233 aaKnown RBP9.25□□□□□ -0.93
HLA-B-258ENST00000640615 PTPN20Q4JDL3 420 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 CYP4A22Q5TCH4 519 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 PPP2R2DQ66LE6 453 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 ZNF662Q6ZS27 426 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 PIGZQ86VD9 579 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 GPR65Q8IYL9 337 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 SPPL2BQ8TCT7 592 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 STK32AQ8WU08 396 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 C2orf15Q8WU43 125 aaKnown RBP9.25□□□□□ -0.93
HLA-B-258ENST00000640615 ARNTL2Q8WYA1 636 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 C18orf8Q96DM3 657 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 ARHGEF26Q96DR7 871 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 FUBP3Q96I24 572 aaKnown RBP eCLIP9.25□□□□□ -0.93
HLA-B-258ENST00000640615 VCPIP1Q96JH7 1222 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 HSFY1Q96LI6 401 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 CPXM1Q96SM3 734 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 KCNK16Q96T55 309 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 SMOQ99835 787 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 EMILIN2Q9BXX0 1053 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 MIS12Q9H081 205 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 SLC28A3Q9HAS3 691 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 LRRC4Q9HBW1 653 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 RXFP1Q9HBX9 757 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 ABCB6Q9NP58 842 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 DMAP1Q9NPF5 467 aaPredicted RBP9.25□□□□□ -0.93
HLA-B-258ENST00000640615 TLR9Q9NR96 1032 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 FNIP2Q9P278 1114 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 CTTNBP2NLQ9P2B4 639 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 TJP2Q9UDY2 1190 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 CNOT8Q9UFF9 292 aaKnown RBP9.25□□□□□ -0.93
HLA-B-258ENST00000640615 CHORDC1Q9UHD1 332 aaPredicted RBP9.25□□□□□ -0.93
HLA-B-258ENST00000640615 STRIP2Q9ULQ0 834 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 GUCA1BQ9UMX6 200 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 SLC27A5Q9Y2P5 690 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 PAXBP1Q9Y5B6 917 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 DUSP10Q9Y6W6 482 aa9.25□□□□□ -0.93
HLA-B-258ENST00000640615 WDR27A2RRH5 827 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 E5RJQ4 531 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 F8VP50 259 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 H3BNC9 293 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 GOLGA8SH3BPF8 625 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 TEX28O15482 410 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 BUB1O43683 1085 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 CYP1A2P05177 515 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 CNPP09543 421 aaKnown RBP9.24□□□□□ -0.93
HLA-B-258ENST00000640615 HAPLN1P10915 354 aaPredicted RBP9.24□□□□□ -0.93
HLA-B-258ENST00000640615 MAGEA11P43364 429 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 ACADSBP45954 432 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 GABRB2P47870 512 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 NDUFV1P49821 464 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 ADCY1Q08828 1119 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 DUSP4Q13115 394 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 RAB33AQ14088 237 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 MGAT5BQ3V5L5 792 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 CFAP221Q4G0U5 840 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 PLPP4Q5VZY2 271 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 TPGS2Q68CL5 300 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 OR6B2Q6IFH4 312 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 LLGL2Q6P1M3 1020 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 DNAJC24Q6P3W2 148 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms