RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 EYA3Q99504 573 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 USB1Q9BQ65 265 aaKnown RBP6.4□□□□□ -1.39
NECAP1-222ENST00000640072 LBHD1Q9BQE6 289 aaPredicted RBP6.4□□□□□ -1.39
NECAP1-222ENST00000640072 WACQ9BTA9 647 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 CAAP1Q9H8G2 361 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 ZC4H2Q9NQZ6 224 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 INTS9Q9NV88 658 aaKnown RBP6.4□□□□□ -1.39
NECAP1-222ENST00000640072 POLR3BQ9NW08 1133 aaPredicted RBP6.4□□□□□ -1.39
NECAP1-222ENST00000640072 GPRC5BQ9NZH0 403 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 USP20Q9Y2K6 914 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 CYP3A7-CYP3A51PA0A087WV96 503 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 NBPF26B4DH59 902 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 LZTS3O60299 673 aaPredicted RBP6.4□□□□□ -1.39
NECAP1-222ENST00000640072 SELLP14151 372 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 GNAZP19086 355 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 CYP3A7P24462 503 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 SLC1A1P43005 524 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 HSD17B4P51659 736 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 PDE1AP54750 535 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 LPIN1Q14693 890 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 UBE3CQ15386 1083 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 CNGA2Q16280 664 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 SMU1Q2TAY7 513 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 KRTCAP3Q53RY4 240 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 TMEM63BQ5T3F8 832 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 C6orf163Q5TEZ5 329 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 SNRNP48Q6IEG0 339 aaKnown RBP6.4□□□□□ -1.39
NECAP1-222ENST00000640072 FOXR2Q6PJQ5 311 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 MRPL10Q7Z7H8 261 aaKnown RBP6.4□□□□□ -1.39
NECAP1-222ENST00000640072 KRT73Q86Y46 540 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 TCEAL8Q8IYN2 117 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 AGGF1Q8N302 714 aaeCLIP6.4□□□□□ -1.39
NECAP1-222ENST00000640072 CAMKK1Q8N5S9 505 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 BSNDQ8WZ55 320 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 AK8Q96MA6 479 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 NUP88Q99567 741 aaPredicted RBP6.4□□□□□ -1.39
NECAP1-222ENST00000640072 RNF38Q9H0F5 515 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 MYLK2Q9H1R3 596 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 PLGRKTQ9HBL7 147 aa6.4□□□□□ -1.39
NECAP1-222ENST00000640072 CASKIN1Q8WXD9 1431 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 SHANK2Q9UPX8 1470 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 B4E1Z4 1266 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 H7C0C1 242 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 CRTAPO75718 401 aaPredicted RBP6.39□□□□□ -1.39
NECAP1-222ENST00000640072 CFBP00751 764 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 HMOX1P09601 288 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 PRKAR1AP10644 381 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 PF4V1P10720 104 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 PABPC1P11940 636 aaKnown RBP6.39□□□□□ -1.39
NECAP1-222ENST00000640072 RAG1P15918 1043 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 KRT6CP48668 564 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 PTPN5P54829 565 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 RNF4P78317 190 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 CYP4F2P78329 520 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 CYP4F3Q08477 520 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 C19orf57Q0VDD7 668 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 HERC3Q15034 1050 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 ZNF423Q2M1K9 1284 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 ERFEQ4G0M1 354 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 ZC2HC1CQ53FD0 456 aaPredicted RBP6.39□□□□□ -1.39
NECAP1-222ENST00000640072 PPP1R26Q5T8A7 1209 aaPredicted RBP6.39□□□□□ -1.39
NECAP1-222ENST00000640072 SHEQ5VZ18 495 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 HAUS3Q68CZ6 603 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 C3orf62Q6ZUJ4 267 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 TRAPPC11Q7Z392 1133 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 TMPRSS9Q7Z410 1059 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 DSG4Q86SJ6 1040 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 NKAPQ8N5F7 415 aaKnown RBP6.39□□□□□ -1.39
NECAP1-222ENST00000640072 ADAM32Q8TC27 787 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 BAP1Q92560 729 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 FRMD8Q9BZ67 464 aaPredicted RBP6.39□□□□□ -1.39
NECAP1-222ENST00000640072 UNKQ9C0B0 810 aaKnown RBP6.39□□□□□ -1.39
NECAP1-222ENST00000640072 C10orf88Q9H8K7 445 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 FBRSQ9HAH7 460 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 TRPV4Q9HBA0 871 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 EPB41L5Q9HCM4 733 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 METTL5Q9NRN9 209 aaKnown RBP6.39□□□□□ -1.39
NECAP1-222ENST00000640072 GIMAP4Q9NUV9 329 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 PARVAQ9NVD7 372 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 AP3M1Q9Y2T2 418 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 NPHP3-ACAD11A0A0J9YXS1 232 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 EYA2O00167 538 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 SHOXO15266 292 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 ADCY6O43306 1168 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 FKBP9O95302 570 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 ATP1A1P05023 1023 aaKnown RBP6.39□□□□□ -1.39
NECAP1-222ENST00000640072 CHRM5P08912 532 aaPredicted RBP6.39□□□□□ -1.39
NECAP1-222ENST00000640072 RARAP10276 462 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 SLC9A1P19634 815 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 G0S2P27469 103 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 CRABP2P29373 138 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 RAB15P59190 212 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 EPHA7Q15375 998 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 KYAT1Q16773 422 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 ZBED8Q8IZ13 594 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 IQCKQ8N0W5 287 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.39□□□□□ -1.39
NECAP1-222ENST00000640072 FBXO27Q8NI29 283 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 DTX3LQ8TDB6 740 aa6.39□□□□□ -1.39
NECAP1-222ENST00000640072 KCTD4Q8WVF5 259 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms