RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 SLITRK1Q96PX8 696 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 NAT9Q9BTE0 207 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 ABCF3Q9NUQ8 709 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 GTSE1Q9NYZ3 720 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 CTNNAL1Q9UBT7 734 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 CPSF3Q9UKF6 684 aaKnown RBP8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 MYH8P13535 1937 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 LOC102724159A0A0B4J2E5 919 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 F8VP50 259 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 EEF2KO00418 725 aaKnown RBP8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 PSMD3O43242 534 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 LIASO43766 372 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 PWP2Q15269 919 aaKnown RBP8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 RABGAP1LQ5R372 815 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 TDRD10Q5VZ19 366 aaKnown RBP8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 TRIM67Q6ZTA4 783 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 SH3BP5LQ7L8J4 393 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 DCLK2Q8N568 766 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 GSDMBQ8TAX9 411 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 FAM172AQ8WUF8 416 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 TFB1MQ8WVM0 346 aaKnown RBP8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 SEMA4DQ92854 862 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 AGAP3Q96P47 875 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 KCNK16Q96T55 309 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 TBCBQ99426 244 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 MAGEB5Q9BZ81 275 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 USP20Q9Y2K6 914 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 MYH3P11055 1940 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 TIAM2Q8IVF5 1701 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 APOC4-APOC2K7ER74 178 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 MTSS1O43312 755 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 APOC2P02655 101 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 CXCL8P10145 99 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 PNPLA4P41247 253 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 RAP1GAPP47736 663 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 TSPY1Q01534 308 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 UGCGQ16739 394 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 PRPF39Q86UA1 669 aaKnown RBP8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 PALB2Q86YC2 1186 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 ICA1LQ8NDH6 482 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 ATXN7L3BQ96GX2 97 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 OLFM3Q96PB7 478 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 TMEM109Q9BVC6 243 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 STXBP5LQ9Y2K9 1186 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 PPP2R3BQ9Y5P8 575 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 CDY2AQ9Y6F7 541 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 CDY1Q9Y6F8 540 aa8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.94□□□□□ -0.98
HNRNPU-219ENST00000639628 C3orf70A6NLC5 250 aaPredicted RBP8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 EIF4E1BA6NMX2 242 aaKnown RBP8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 ACKR2O00590 384 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 GLRA3O75311 464 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 MTA2O94776 668 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 CNTFP26441 200 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 PMLP29590 882 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 SSTR1P30872 391 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 CHKAP35790 457 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 PTGER2P43116 358 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 ESRRGP62508 458 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 OCRLQ01968 901 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 SMAD1Q15797 465 aaKnown RBP8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 SV2CQ496J9 727 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 DAB2IPQ5VWQ8 1189 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 TCP10LQ8TDR4 215 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.93□□□□□ -0.981e-7■■■□□ 15.8
HNRNPU-219ENST00000639628 UBQLN1Q9UMX0 589 aaKnown RBP8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 STARD13Q9Y3M8 1113 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 NUP98P52948 1817 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 TRPA1O75762 1119 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 GJB6O95452 261 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 SETSIPP0DME0 302 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 MYL2P10916 166 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 TGM2P21980 687 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 GLRA2P23416 452 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 GNL1P36915 607 aaPredicted RBP8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 ELK3P41970 407 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 ALDH5A1P51649 535 aaPredicted RBP8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 ALLCQ8N6M5 410 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 SDCCAG3Q96C92 435 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 ASB7Q9H672 318 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 NSMCE4AQ9NXX6 385 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 RRN3P2A6NIE6 340 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 MCF2P10911 925 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 PYGBP11216 843 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 DCAF6Q58WW2 860 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 RARS2Q5T160 578 aaKnown RBP8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 NOTUMQ6P988 496 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 CRELD2Q6UXH1 353 aaPredicted RBP8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 ANKRD13AQ8IZ07 590 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 ABI1Q8IZP0 508 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 HELQQ8TDG4 1101 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 ASAP3Q8TDY4 903 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 TMEM120AQ9BXJ8 343 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 SLC24A3Q9HC58 644 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 TMEM59LQ9UK28 342 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 BARX2Q9UMQ3 279 aaPredicted RBP8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 NPTXRO95502 500 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 CHEK2O96017 543 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 CALCAP01258 141 aa8.93□□□□□ -0.98
HNRNPU-219ENST00000639628 S100BP04271 92 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms