RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 RHBGQ9H310 441 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 CHMP1AQ9HD42 196 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 VAV3Q9UKW4 847 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PTCH2Q9Y6C5 1203 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 KNL1Q8NG31 2342 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 TCP11X1B4DZS4 312 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ZPR1O75312 459 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 HSD3B1P14060 373 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 NPR3P17342 541 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 ATXN1P54253 815 aaKnown RBP4.48□□□□□ -1.69
SCN3A-209ENST00000639244 CBLBQ13191 982 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 SPARCL1Q14515 664 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PON2Q15165 354 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 RTP2Q5QGT7 225 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PM20D1Q6GTS8 502 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 GSTA5Q7RTV2 222 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 MICALL2Q8IY33 904 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 MTMR14Q8NCE2 650 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 CYTH2Q99418 400 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 PHF20Q9BVI0 1012 aa4.48□□□□□ -1.69
SCN3A-209ENST00000639244 H0YIV9 168 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TRAPPC3O43617 180 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 AKR1B1P15121 316 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CAPN3P20807 821 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PIP4K2AP48426 406 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CACNA2D1P54289 1103 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 RELAQ04206 551 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 BMPR2Q13873 1038 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 UAP1Q16222 522 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 KRTCAP3Q53RY4 240 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 HERC4Q5GLZ8 1057 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 HID1Q8IV36 788 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF527Q8NB42 609 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF566Q969W8 418 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CDK5RAP1Q96SZ6 601 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 C17orf80Q9BSJ5 609 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 WACQ9BTA9 647 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 C1orf112Q9NSG2 853 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TLR7Q9NYK1 1049 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 STX18Q9P2W9 335 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 MBD1Q9UIS9 605 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CLEC11AQ9Y240 323 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PDS5AQ29RF7 1337 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 USP47Q96K76 1375 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 NBPF26B4DH59 902 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PSMA7O14818 248 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PTDSS1P48651 473 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 GALK1P51570 392 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 UBE3AQ05086 875 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 MORF4L2Q15014 288 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PALB2Q86YC2 1186 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 USB1Q9BQ65 265 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TDRD1Q9BXT4 1180 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PAIP1Q9H074 479 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 STARD13Q9Y3M8 1113 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CACNG2Q9Y698 323 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PLATP00750 562 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TFEBP19484 476 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CASP14P31944 242 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PGDP52209 483 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 NLRP11P59045 1033 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CDR2Q01850 454 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ILF2Q12905 390 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 HERC3Q15034 1050 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 SF3B4Q15427 424 aaKnown RBP eCLIP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 SMAD1Q15797 465 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 GRTP1Q5TC63 336 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TAS2R42Q7RTR8 314 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PRUNE1Q86TP1 453 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ZBTB38Q8NAP3 1195 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 OR5T1Q8NG75 326 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 PNPT1Q8TCS8 783 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CCT8L2Q96SF2 557 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 COG4Q9H9E3 785 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 FAM105AQ9NUU6 356 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TXNDC16Q9P2K2 825 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 CYB5R1Q9UHQ9 305 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 HCN4Q9Y3Q4 1203 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 SOS2Q07890 1332 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ARID1AO14497 2285 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ALOX15BO15296 676 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 IFNB1P01574 187 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 NR3C2P08235 984 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 MYL6BP14649 208 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 RAG1P15918 1043 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TCEA1P23193 301 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 YWHAEP62258 255 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ART3Q13508 389 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TBRG1Q3YBR2 411 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 NXPE3Q969Y0 559 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 ABCC11Q96J66 1382 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 MED15Q96RN5 788 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 MYD88Q99836 296 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 BBS2Q9BXC9 721 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TEX12Q9BXU0 123 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 IFIH1Q9BYX4 1025 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 TFB2MQ9H5Q4 396 aaKnown RBP4.47□□□□□ -1.69
SCN3A-209ENST00000639244 GLRX2Q9NS18 164 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 SIK3Q9Y2K2 1263 aa4.47□□□□□ -1.69
SCN3A-209ENST00000639244 RUSC2Q8N2Y8 1516 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms