RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 RAX2Q96IS3 184 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 CLUHP3Q96NS8 147 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 GPR101Q96P66 508 aaPredicted RBP1.32□□□□□ -2.2
LMBR1-222ENST00000638959 CCDC113Q9H0I3 377 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 MANSC1Q9H8J5 431 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 SDF2L1Q9HCN8 221 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 ASIC5Q9NY37 505 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 ETAA1Q9NY74 926 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 MYO6Q9UM54 1294 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 LIMCH1Q9UPQ0 1083 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 NEMP1O14524 444 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 ZG16O60844 167 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 ZNF883P0CG24 379 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 LPOP22079 712 aaPredicted RBP1.31□□□□□ -2.2
LMBR1-222ENST00000638959 SP2Q02086 613 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 TCEA2Q15560 299 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 CCDC6Q16204 474 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 ICE2Q659A1 982 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 MTHFD1LQ6UB35 978 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 DSTYKQ6XUX3 929 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 BCDIN3DQ7Z5W3 292 aaKnown RBP1.31□□□□□ -2.2
LMBR1-222ENST00000638959 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.31□□□□□ -2.2
LMBR1-222ENST00000638959 AUTS2Q8WXX7 1259 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 GLG1Q92896 1179 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 ACE2Q9BYF1 805 aaPredicted RBP1.31□□□□□ -2.2
LMBR1-222ENST00000638959 CDT1Q9H211 546 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 SLC7A10Q9NS82 523 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 SERTAD3Q9UJW9 196 aa1.31□□□□□ -2.2
LMBR1-222ENST00000638959 IGKV3D-15A0A087WSY6 115 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 A1L4Q6 167 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 VPS4BO75351 444 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 APOHP02749 345 aaPredicted RBP1.3□□□□□ -2.2
LMBR1-222ENST00000638959 GLIPR1P48060 266 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 CSRP3P50461 194 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 CLCN5P51795 746 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 YPEL5P62699 121 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 OCRLQ01968 901 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 MGAT2Q10469 447 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 BOP1Q14137 746 aaKnown RBP1.3□□□□□ -2.2
LMBR1-222ENST00000638959 SHBQ15464 509 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 C9orf57Q5W0N0 161 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 PLEKHA7Q6IQ23 1121 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 TMEM65Q6PI78 240 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.3□□□□□ -2.2
LMBR1-222ENST00000638959 PHF21BQ96EK2 531 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 SCNM1Q9BWG6 230 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 GZF1Q9H116 711 aaPredicted RBP1.3□□□□□ -2.2
LMBR1-222ENST00000638959 SPTLC3Q9NUV7 552 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 TMEM45AQ9NWC5 275 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 RAD54BQ9Y620 910 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 NFS1Q9Y697 457 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 WDR81Q562E7 1941 aa1.3□□□□□ -2.2
LMBR1-222ENST00000638959 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 PLSCR5A0PG75 271 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 FAM171A2A8MVW0 826 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 H0YGN5 161 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 SYT5O00445 386 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 EXTL3O43909 919 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 KPNA6O60684 536 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 KRT36O76013 467 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 GCLCP48506 637 aaPredicted RBP1.29□□□□□ -2.2
LMBR1-222ENST00000638959 SOX8P57073 446 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 HSF1Q00613 529 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 EEF1A2Q05639 463 aaKnown RBP1.29□□□□□ -2.2
LMBR1-222ENST00000638959 SART3Q15020 963 aaKnown RBP1.29□□□□□ -2.2
LMBR1-222ENST00000638959 FSCN1Q16658 493 aaKnown RBP1.29□□□□□ -2.2
LMBR1-222ENST00000638959 ANO6Q4KMQ2 910 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 C4orf46Q504U0 113 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 FNDC3BQ53EP0 1204 aaKnown RBP1.29□□□□□ -2.2
LMBR1-222ENST00000638959 BROXQ5VW32 411 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 SFRP4Q6FHJ7 346 aaPredicted RBP1.29□□□□□ -2.2
LMBR1-222ENST00000638959 WBP2NLQ6ICG8 309 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 TMEM108Q6UXF1 575 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 TRAPPC11Q7Z392 1133 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 UBE2Q1Q7Z7E8 422 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 KIF18BQ86Y91 864 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 C16orf71Q8IYS4 520 aaPredicted RBP1.29□□□□□ -2.2
LMBR1-222ENST00000638959 IL17RDQ8NFM7 739 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 ATG4AQ8WYN0 398 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 PYGO2Q9BRQ0 406 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 DPCDQ9BVM2 203 aaPredicted RBP1.29□□□□□ -2.2
LMBR1-222ENST00000638959 QRSL1Q9H0R6 528 aaKnown RBP1.29□□□□□ -2.2
LMBR1-222ENST00000638959 IFT122Q9HBG6 1241 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 SCRT2Q9NQ03 307 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 MRPS18AQ9NVS2 196 aaKnown RBP1.29□□□□□ -2.2
LMBR1-222ENST00000638959 ANAPC4Q9UJX5 808 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 MAFFQ9ULX9 164 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 INSL5Q9Y5Q6 135 aa1.29□□□□□ -2.2
LMBR1-222ENST00000638959 ZNF785A8K8V0 405 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 ZNF814B7Z6K7 855 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 AP4M1O00189 453 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 BUB3O43684 328 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 MT-CO3P00414 261 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 ANXA1P04083 346 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 ENPP1P22413 925 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 ATP12AP54707 1039 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 LMAN2Q12907 356 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 LARS2Q15031 903 aaKnown RBP1.28□□□□□ -2.2
LMBR1-222ENST00000638959 ZRSR1Q15695 479 aaKnown RBP1.28□□□□□ -2.2
LMBR1-222ENST00000638959 MUM1Q2TAK8 710 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms