RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 EPC1Q9H2F5 836 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 ITM2CQ9NQX7 267 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 GJB4Q9NTQ9 266 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 MAP3K20Q9NYL2 800 aaKnown RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 TMOD4Q9NZQ9 345 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 KIF17Q9P2E2 1029 aa3.45□□□□□ -1.86
GYPB-216ENST00000638448 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.45□□□□□ -1.86
GYPB-216ENST00000638448 SRP68Q9UHB9 627 aaKnown RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 FBXO9Q9UK97 447 aaPredicted RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 MTO1Q9Y2Z2 717 aaKnown RBP3.45□□□□□ -1.86
GYPB-216ENST00000638448 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 A0A0B4J269 797 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 CCDC195A0A1B0GUA6 201 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 RRN3P2A6NIE6 340 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 DRGXA6NNA5 263 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 HOXC11O43248 304 aaPredicted RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 ASNA1O43681 348 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 MFAP3LO75121 409 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 COQ9O75208 318 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 STC2O76061 302 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 KIF20AO95235 890 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 AGR2O95994 175 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 TK1P04183 234 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 C1SP09871 688 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 FCER1AP12319 257 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 MSX2P35548 267 aaPredicted RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 ZEB1P37275 1124 aaPredicted RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 PTDSS1P48651 473 aaKnown RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 TOB1P50616 345 aaPredicted RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 DGKEP52429 567 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 RAP2BP61225 183 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 ATP1A4Q13733 1029 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 GRM7Q14831 915 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 CSRP2Q16527 193 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 FAM214AQ32MH5 1076 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 TMTC4Q5T4D3 741 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 SFRP4Q6FHJ7 346 aaPredicted RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 RETSATQ6NUM9 610 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 KLHL17Q6TDP4 642 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 CRTC1Q6UUV9 634 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 MAMDC4Q6UXC1 1216 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 MOGAT3Q86VF5 341 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 TICAM2Q86XR7 235 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 HERC6Q8IVU3 1022 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 SLC44A2Q8IWA5 706 aaPredicted RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 NRSN1Q8IZ57 195 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 ANKRD35Q8N283 1001 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 CLASRPQ8N2M8 674 aaKnown RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 SLC17A8Q8NDX2 589 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 SIMC1Q8NDZ2 872 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 MBD3L2Q8NHZ7 208 aaPredicted RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 STYXQ8WUJ0 223 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 PRPF18Q99633 342 aaKnown RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 CPPED1Q9BRF8 314 aaPredicted RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 RTKNQ9BST9 563 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 SLC46A2Q9BY10 475 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 IMPG2Q9BZV3 1241 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 PABPC3Q9H361 631 aaKnown RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 RNPEPQ9H4A4 650 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 SLITRK6Q9H5Y7 841 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 RXFP3Q9NSD7 469 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 PI4KBQ9UBF8 816 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 ZMYND8Q9ULU4 1186 aaPredicted RBP3.44□□□□□ -1.86
GYPB-216ENST00000638448 HS3ST4Q9Y661 456 aa3.44□□□□□ -1.86
GYPB-216ENST00000638448 A0A1W2PS29 197 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 F5H0A9 414 aaPredicted RBP3.43□□□□□ -1.86
GYPB-216ENST00000638448 EYA2O00167 538 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 RAB27BO00194 218 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 POLRMTO00411 1230 aaKnown RBP3.43□□□□□ -1.86
GYPB-216ENST00000638448 PCDH17O14917 1159 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 PIP5K1BO14986 540 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 DCLK1O15075 740 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 DHHO43323 396 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 ACTL6BO94805 426 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 VIPP01282 170 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 ITGB1P05556 798 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 HLA-DOAP06340 250 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 ACRV1P26436 265 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 PXNP49023 591 aaPredicted RBP3.43□□□□□ -1.86
GYPB-216ENST00000638448 PNLIPRP1P54315 467 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 ALDH18A1P54886 795 aaKnown RBP3.43□□□□□ -1.86
GYPB-216ENST00000638448 AP2B1P63010 937 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 MPP1Q00013 466 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 ABHD18Q0P651 414 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 LMOD3Q0VAK6 560 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 FOXL1Q12952 345 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 FHL2Q14192 279 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 HLXQ14774 488 aaPredicted RBP3.43□□□□□ -1.86
GYPB-216ENST00000638448 CLCA4Q14CN2 919 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 ACAP1Q15027 740 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 FAM110CQ1W6H9 321 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 ATPAF1Q5TC12 328 aaPredicted RBP3.43□□□□□ -1.86
GYPB-216ENST00000638448 MANEALQ5VSG8 457 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 WDR78Q5VTH9 848 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 RRAGBQ5VZM2 374 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 METRNLQ641Q3 311 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 ARMC6Q6NXE6 501 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 TAPT1Q6NXT6 567 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 GGT6Q6P531 493 aa3.43□□□□□ -1.86
GYPB-216ENST00000638448 ZDHHC24Q6UX98 284 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms