RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 RNF8O76064 485 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 OAS1P00973 400 aaKnown RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 TNNC2P02585 160 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 CCNB1P14635 433 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 VCPP55072 806 aaKnown RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 PDIA2Q13087 525 aaKnown RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 TFDP2Q14188 446 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 TBCCQ15814 346 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 PDK4Q16654 411 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 GALNTL6Q49A17 601 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 XKR3Q5GH77 459 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 C1orf220Q5T0J3 134 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 TMCO4Q5TGY1 634 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 PRAMEF18Q5VWM3 479 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 AADACL2Q6P093 401 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 RHBDF2Q6PJF5 856 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 TMEM270Q6UE05 265 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 SH3BP5LQ7L8J4 393 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 ZBTB33Q86T24 672 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 ERICH1Q86X53 443 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 MAP7D3Q8IWC1 876 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 ZBTB8OSQ8IWT0 167 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 UBALD2Q8IYN6 164 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 ZBED8Q8IZ13 594 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 TMEM161BQ8NDZ6 487 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 PPP1R14CQ8TAE6 165 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 AGAP11Q8TF27 550 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 CPA5Q8WXQ8 436 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 THOC1Q96FV9 657 aaKnown RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 CGRRF1Q99675 332 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 TCHPQ9BT92 498 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 MSTO1Q9BUK6 570 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 POLR3FQ9H1D9 316 aaPredicted RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 IFT122Q9HBG6 1241 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 PAK6Q9NQU5 681 aaPredicted RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 CHST7Q9NS84 486 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 MAGEB2O15479 319 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 KRT37O76014 449 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 PTPN4P29074 926 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 RAD23BP54727 409 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 MXRA7P84157 204 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 SIX1Q15475 284 aaPredicted RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 KCTD19Q17RG1 926 aaPredicted RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 FAM160B1Q5W0V3 765 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 VSTM1Q6UX27 236 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 TRMT1LQ7Z2T5 733 aaKnown RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 TRABD2AQ86V40 505 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 DAW1Q8N136 415 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 CXorf38Q8TB03 319 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 ACER1Q8TDN7 264 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 NSUN6Q8TEA1 469 aaKnown RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 ATG4AQ8WYN0 398 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 KAT5Q92993 513 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 DCLRE1BQ9H816 532 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 RNPEPL1Q9HAU8 725 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 MLXIPLQ9NP71 852 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 CYP26B1Q9NR63 512 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 HOMER2Q9NSB8 354 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 RBAKQ9NYW8 714 aaPredicted RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 GABBR1Q9UBS5 961 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 ZNF70Q9UC06 446 aaPredicted RBP4.17□□□□□ -1.74
SCN1A-214ENST00000637038 SCOCQ9UIL1 159 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 EFR3BQ9Y2G0 817 aa4.17□□□□□ -1.74
SCN1A-214ENST00000637038 CFAP69A5D8W1 941 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 K7ERI5 159 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ZBTB39O15060 712 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 LIASO43766 372 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ZNF189O75820 626 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 CD58P19256 250 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 TAC1P20366 129 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 CALB2P22676 271 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 PTPN7P35236 360 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 CHKAP35790 457 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 CAP2P40123 477 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 RFC5P40937 340 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 EFNA5P52803 228 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ARFIP2P53365 341 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 KCNJ2P63252 427 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 LEXMQ3ZCV2 418 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 C4orf22Q6V702 233 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 SPOCD1Q6ZMY3 1216 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 LONP2Q86WA8 852 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 THNSL1Q8IYQ7 743 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 KIF2BQ8N4N8 673 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 FBXL6Q8N531 539 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 TTC39CQ8N584 583 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 STK32AQ8WU08 396 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 DDX27Q96GQ7 796 aaKnown RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 FBXL18Q96ME1 805 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 APBA2Q99767 749 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 CYP39A1Q9NYL5 469 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 CPSF2Q9P2I0 782 aaKnown RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 GMEB2Q9UKD1 530 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 DNAH12Q6ZR08 3092 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 RALGAPA2Q2PPJ7 1873 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 LRRIQ4A6NIV6 560 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ANKRD63C9JTQ0 380 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 HGSO14964 777 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ALOX15BO15296 676 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms