RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 CGRRF1Q99675 332 aa4.22□□□□□ -1.73
CLN5-214ENST00000636705 GPR20Q99678 358 aa4.22□□□□□ -1.73
CLN5-214ENST00000636705 TMEM47Q9BQJ4 181 aa4.22□□□□□ -1.73
CLN5-214ENST00000636705 EMILIN2Q9BXX0 1053 aa4.22□□□□□ -1.73
CLN5-214ENST00000636705 MRPL9Q9BYD2 267 aaKnown RBP4.22□□□□□ -1.73
CLN5-214ENST00000636705 IGFLR1Q9H665 355 aa4.22□□□□□ -1.73
CLN5-214ENST00000636705 NOL6Q9H6R4 1146 aaKnown RBP4.22□□□□□ -1.73
CLN5-214ENST00000636705 RUBCNLQ9H714 662 aa4.22□□□□□ -1.73
CLN5-214ENST00000636705 GPAMQ9HCL2 828 aa4.22□□□□□ -1.73
CLN5-214ENST00000636705 ZBTB40Q9NUA8 1239 aa4.22□□□□□ -1.73
CLN5-214ENST00000636705 PLAGL2Q9UPG8 496 aa4.22□□□□□ -1.73
CLN5-214ENST00000636705 SORCS3Q9UPU3 1222 aa4.22□□□□□ -1.73
CLN5-214ENST00000636705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.22□□□□□ -1.73
CLN5-214ENST00000636705 PCDHGB5Q9Y5G0 923 aa4.22□□□□□ -1.73
CLN5-214ENST00000636705 CAPN8A6NHC0 703 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 LGALS16A8MUM7 142 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 GOLGA6L6A8MZA4 724 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 GCOM1H8Y6P7 765 aaPredicted RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 HIP1O00291 1037 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 AQP7O14520 342 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 GSNP06396 782 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 PARP1P09874 1014 aaKnown RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 POLR2MP0CAP2 368 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 SNHG28P0DPA3 235 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 ESRRAP11474 423 aaPredicted RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 HARSP12081 509 aaKnown RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 MYF5P13349 255 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 ARL4CP56559 192 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 PLAURQ03405 335 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 TCF15Q12870 199 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 DBN1Q16643 649 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 SAMD5Q5TGI4 173 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 METTL7BQ6UX53 244 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 SLC30A10Q6XR72 485 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 DSTYKQ6XUX3 929 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.21□□□□□ -1.74
CLN5-214ENST00000636705 CYFIP1Q7L576 1253 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 DHX32Q7L7V1 743 aaKnown RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 VSIG10LQ86VR7 867 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 SIRT2Q8IXJ6 389 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 COLGALT2Q8IYK4 626 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 ARHGEF39Q8N4T4 335 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 KREMEN2Q8NCW0 462 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 FAM13CQ8NE31 585 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 ZNF837Q96EG3 531 aaPredicted RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 CELF4Q9BZC1 486 aaKnown RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 KRT23Q9C075 422 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 GHITMQ9H3K2 345 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 PXMP2Q9NR77 195 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 EIF2B4Q9UI10 523 aaKnown RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 GPR55Q9Y2T6 319 aaPredicted RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 PCDHB7Q9Y5E2 793 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 A0A087X0M5 115 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 A0A1B0GX30 115 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 HOXC11O43248 304 aaPredicted RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 FOXD2O60548 495 aaPredicted RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 DGKIO75912 1065 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 GGPS1O95749 300 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 SMIM10L2AP0DMW4 78 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 SMIM10L2BP0DMW5 78 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 LAG3P18627 525 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 FGFR4P22455 802 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 HOXC8P31273 242 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 HPDP32754 393 aaPredicted RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 LTBRP36941 435 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 ALDH9A1P49189 494 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 MTNR1BP49286 362 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 SEPHS1P49903 392 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 SLC26A2P50443 739 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 RRP1P56182 461 aaKnown RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 CDC42EP1Q00587 391 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 PPP2R5DQ14738 602 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 GPNMBQ14956 572 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 PTPN14Q15678 1187 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 TOR2AQ5JU69 321 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 SPOUT1Q5T280 376 aaKnown RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 STOX1Q6ZVD7 989 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 MAEAQ7L5Y9 396 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 VSIG1Q86XK7 387 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 ZDHHC14Q8IZN3 488 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 BAHD1Q8TBE0 780 aaPredicted RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 ANKS1AQ92625 1134 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 ERCC4Q92889 916 aaPredicted RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 ZNF689Q96CS4 500 aaPredicted RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 JAKMIP1Q96N16 626 aaKnown RBP4.21□□□□□ -1.74
CLN5-214ENST00000636705 PHF20Q9BVI0 1012 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 AGXT2Q9BYV1 514 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 SMARCAD1Q9H4L7 1026 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 OBP2BQ9NPH6 170 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 TLR9Q9NR96 1032 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 IL17RBQ9NRM6 502 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 IRAK4Q9NWZ3 460 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 ERAP1Q9NZ08 941 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 TJP2Q9UDY2 1190 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 SOX13Q9UN79 622 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 EDARQ9UNE0 448 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 PCDHA1Q9Y5I3 950 aa4.21□□□□□ -1.74
CLN5-214ENST00000636705 TTC28Q96AY4 2481 aa4.2□□□□□ -1.74
CLN5-214ENST00000636705 ERICH2A1L162 156 aa4.2□□□□□ -1.74
CLN5-214ENST00000636705 PRR23AA6NEV1 266 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms