RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 SPATA31D3P0C874 917 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 MSH3P20585 1137 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 OXCT1P55809 520 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 SPATA31D4Q6ZUB0 917 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 P3H2Q8IVL5 708 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 THAP11Q96EK4 314 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 H7C4K7 107 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 POLBP06746 335 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 CCNIQ14094 377 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 ZC3H15Q8WU90 426 aaKnown RBP18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 OMDQ99983 421 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 NSMCE4AQ9NXX6 385 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 TRIM43BA6NCK2 446 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 HLA-DRAP01903 254 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 SH3BGRP55822 239 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 LY6KQ17RY6 165 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 RNPC3Q96LT9 517 aaKnown RBP18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 POP1Q99575 1024 aaKnown RBP18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 MIEF1Q9NQG6 463 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 SHOC2Q9UQ13 582 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 ZNF200P98182 395 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 KCNV1Q6PIU1 500 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 UTS2BQ765I0 119 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 LPCAT1Q8NF37 534 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 KRCC1Q9NPI7 259 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 NEU2Q9Y3R4 380 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 ROBO2Q9HCK4 1378 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 SCAMP1O15126 338 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 ZDHHC6Q9H6R6 413 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 VPS26AO75436 327 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 NUP62P37198 522 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 NUDT2P50583 147 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 MTHFD1LQ6UB35 978 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 VPS37AQ8NEZ2 397 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 PANX2Q96RD6 677 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 MTMR12Q9C0I1 747 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 SPRTNQ9H040 489 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 SYBUQ9NX95 663 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 ACAT1P24752 427 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 SP8Q8IXZ3 490 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 IZUMO1Q8IYV9 350 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 RCOR2Q8IZ40 523 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 KIF2BQ8N4N8 673 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 USP6NLQ92738 828 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 CYFIP2Q96F07 1278 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 FICDQ9BVA6 458 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 TARS2Q9BW92 718 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 SSH2Q76I76 1423 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 GTF2A2P52657 109 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 OVGP1Q12889 678 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 SGSM1Q2NKQ1 1148 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 POMZP3Q6PJE2 187 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 NECAB2Q7Z6G3 386 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 OR8H2Q8N162 312 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 ADAM32Q8TC27 787 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 CALML6Q8TD86 181 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 OLFM1Q99784 485 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 NR5A2O00482 541 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 TIPRLO75663 272 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 NDUFB10O96000 172 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 PYGMP11217 842 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 AMD1P17707 334 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 CASP4P49662 377 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 EPHX4Q8IUS5 362 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 SCFD2Q8WU76 684 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 DNAJB3Q8WWF6 145 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 USP7Q93009 1102 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 OSMRQ99650 979 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 RNF208Q9H0X6 261 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 GPR182O15218 404 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 ATP6V1B1P15313 513 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 ATP6V1B2P21281 511 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 MTF1Q14872 753 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 PZPP20742 1482 aa18.47■□□□□ 0.55
CACNA1A-227ENST00000636549 LGALS16A8MUM7 142 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 STXBP3O00186 592 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 PCSK1P29120 753 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 KCNJ1P48048 391 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 BFSP2Q13515 415 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 ZSWIM7Q19AV6 140 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 CCDC92Q53HC0 331 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 CYP20A1Q6UW02 462 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 AASDHPPTQ9NRN7 309 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 LNPEPQ9UIQ6 1025 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 DIS3Q9Y2L1 958 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 PIPSLA2A3N6 862 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 LRRIQ3A6PVS8 624 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 KIF1CO43896 1103 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 OR6A2O95222 327 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 ZNF697Q5TEC3 545 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 FAAH2Q6GMR7 532 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 CCDC149Q6ZUS6 474 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 ADGRF2Q8IZF7 708 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 RPRD1BQ9NQG5 326 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 ACSL4O60488 711 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 NR3C2P08235 984 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 AHI1Q8N157 1196 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 CELF4Q9BZC1 486 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 RNF14Q9UBS8 474 aa18.46■□□□□ 0.55
CACNA1A-227ENST00000636549 PTGER2P43116 358 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms