RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 F11P03951 625 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 P4HA1P13674 534 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 BDNFP23560 247 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 DDX6P26196 483 aaKnown RBP eCLIP19.59■□□□□ 0.73
CLN6-214ENST00000636314 ANXA13P27216 316 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 CXCL12P48061 93 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 ZCWPW2Q504Y3 356 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 SV2AQ7L0J3 742 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 TMEM150AQ86TG1 271 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 SMARCE1Q969G3 411 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 GSDMAQ96QA5 445 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 DPEP3Q9H4B8 488 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 OBP2AQ9NY56 170 aa19.59■□□□□ 0.73
CLN6-214ENST00000636314 TPRP12270 2363 aaKnown RBP19.59■□□□□ 0.73
CLN6-214ENST00000636314 CHADO15335 359 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 TRIM49P0CI25 452 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 TRIM49CP0CI26 452 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 CHRNB1P11230 501 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 PTPN1P18031 435 aaKnown RBP19.58■□□□□ 0.72
CLN6-214ENST00000636314 WEE1P30291 646 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 PSMC2P35998 433 aaKnown RBP19.58■□□□□ 0.72
CLN6-214ENST00000636314 AVPR1AP37288 418 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 GRIK1P39086 918 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 RAP1GAPP47736 663 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 FCHO2Q0JRZ9 810 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 ADAM9Q13443 819 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 SIM2Q14190 667 aaPredicted RBP19.58■□□□□ 0.72
CLN6-214ENST00000636314 SGSM1Q2NKQ1 1148 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 EDRF1Q3B7T1 1238 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 ZNF658Q5TYW1 1059 aaPredicted RBP19.58■□□□□ 0.72
CLN6-214ENST00000636314 MAMSTRQ6ZN01 415 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 CMTM8Q8IZV2 173 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 MAB21L3Q8N8X9 362 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 B3GALNT2Q8NCR0 500 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 MYRFLQ96LU7 910 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 TIGD1Q96MW7 591 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 SLC46A2Q9BY10 475 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 IMPG2Q9BZV3 1241 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 SMG9Q9H0W8 520 aaKnown RBP19.58■□□□□ 0.72
CLN6-214ENST00000636314 CIZ1Q9ULV3 898 aaPredicted RBP19.58■□□□□ 0.72
CLN6-214ENST00000636314 EPG5Q9HCE0 2579 aa19.58■□□□□ 0.72
CLN6-214ENST00000636314 CHURC1-FNTBB4DL54 471 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 TRIM66O15016 1216 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 TADA3O75528 432 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 RETP07949 1114 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 FNTBP49356 437 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 KPNA1P52294 538 aaPredicted RBP19.57■□□□□ 0.72
CLN6-214ENST00000636314 CDH8P55286 799 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 LRRC32Q14392 662 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 ARHGAP29Q52LW3 1261 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 C1orf220Q5T0J3 134 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 TXNDC8Q6A555 127 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 NETO1Q8TDF5 533 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 BPIFB1Q8TDL5 484 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 TAF4BQ92750 862 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 ERCC4Q92889 916 aaPredicted RBP19.57■□□□□ 0.72
CLN6-214ENST00000636314 ELMO3Q96BJ8 720 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 SPATA17Q96L03 361 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 CEP295NLQ96MC4 621 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 ELOVL4Q9GZR5 314 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 PCDHA5Q9Y5H7 936 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 ANAPC1Q9H1A4 1944 aa19.57■□□□□ 0.72
CLN6-214ENST00000636314 ATP8B3O60423 1300 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.56■□□□□ 0.72
CLN6-214ENST00000636314 ARNTLO00327 626 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 HLA-DRAP01903 254 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 PRCPP42785 496 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 GCLMP48507 274 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 ENPEPQ07075 957 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 DMWDQ09019 674 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 GAS6Q14393 721 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.56■□□□□ 0.72
CLN6-214ENST00000636314 TNIP3Q96KP6 325 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 TSG101Q99816 390 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 GTPBP4Q9BZE4 634 aaKnown RBP19.56■□□□□ 0.72
CLN6-214ENST00000636314 MMRN2Q9H8L6 949 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 TRPC7Q9HCX4 862 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 RBM12Q9NTZ6 932 aaKnown RBP19.56■□□□□ 0.72
CLN6-214ENST00000636314 ACACBO00763 2458 aa19.56■□□□□ 0.72
CLN6-214ENST00000636314 SOBPA7XYQ1 873 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 F8VP50 259 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 CETN3O15182 167 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 LRP3O75074 770 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 ASS1P00966 412 aaKnown RBP19.55■□□□□ 0.72
CLN6-214ENST00000636314 ADRB1P08588 477 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 EPB41P11171 864 aaKnown RBP19.55■□□□□ 0.72
CLN6-214ENST00000636314 SOX9P48436 509 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 PLCB2Q00722 1185 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 SRSF5Q13243 272 aaKnown RBP19.55■□□□□ 0.72
CLN6-214ENST00000636314 COBLL1Q53SF7 1204 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 PPM1JQ5JR12 505 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 HEATR6Q6AI08 1181 aaKnown RBP19.55■□□□□ 0.72
CLN6-214ENST00000636314 DENND5BQ6ZUT9 1274 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 MON1AQ86VX9 555 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 SPEM1Q8N4L4 309 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 SPATA20Q8TB22 786 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 EEF2KMTQ96G04 330 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 MSANTD3Q96H12 275 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 ZFYVE19Q96K21 471 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 LRRC3BQ96PB8 259 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms