RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 VDRP11473 427 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 LAMP2P13473 410 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 MAP3K7CLP57077 242 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 UBXN1Q04323 297 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 FILIP1LQ4L180 1135 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 ARHGAP15Q53QZ3 475 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 ARHGAP17Q68EM7 881 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 APTXQ7Z2E3 356 aaKnown RBP16.4■□□□□ 0.22
CLN6-211ENST00000635754 SHKBP1Q8TBC3 707 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 KCNK16Q96T55 309 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 ATXN3LQ9H3M9 355 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 CSNK1G1Q9HCP0 422 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 GDE1Q9NZC3 331 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 EPS15L1Q9UBC2 864 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 DNAJC12Q9UKB3 198 aa16.4■□□□□ 0.22
CLN6-211ENST00000635754 GJA1P17302 382 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 NPR3P17342 541 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 ZNF132P52740 706 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 SLC8A3P57103 927 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 TEAD2Q15562 447 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 KLHDC7AQ5VTJ3 777 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 CLEC20AQ6ZU45 233 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 GAREM2Q75VX8 874 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 NUP93Q8N1F7 819 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 SHC3Q92529 594 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 SMOQ99835 787 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 COL25A1Q9BXS0 654 aaPredicted RBP16.39■□□□□ 0.21
CLN6-211ENST00000635754 DUSP16Q9BY84 665 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 SLITRK6Q9H5Y7 841 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 IL21Q9HBE4 155 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 CD320Q9NPF0 282 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 PLCB1Q9NQ66 1216 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 HESX1Q9UBX0 185 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 LIMD1Q9UGP4 676 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 CNTN6Q9UQ52 1028 aa16.39■□□□□ 0.21
CLN6-211ENST00000635754 MYO16Q9Y6X6 1858 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 RNF225M0QZC1 329 aaPredicted RBP16.38■□□□□ 0.21
CLN6-211ENST00000635754 MOSPD3O75425 235 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 BEST1O76090 585 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 RTN3O95197 1032 aaPredicted RBP16.38■□□□□ 0.21
CLN6-211ENST00000635754 UCHL3P15374 230 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 USP8P40818 1118 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 RAPGEF1Q13905 1077 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 SYCP1Q15431 976 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 STILQ15468 1287 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 GOLGA7BQ2TAP0 167 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 SMYD5Q6GMV2 418 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 RNF135Q8IUD6 432 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 ZMIZ2Q8NF64 920 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 MCRS1Q96EZ8 462 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 PCMTD1Q96MG8 357 aaPredicted RBP16.38■□□□□ 0.21
CLN6-211ENST00000635754 TTLL2Q9BWV7 592 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 GPR88Q9GZN0 384 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 PNPLA8Q9NP80 782 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 AJAP1Q9UKB5 411 aaPredicted RBP16.38■□□□□ 0.21
CLN6-211ENST00000635754 TSPAN16Q9UKR8 245 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 FHOD1Q9Y613 1164 aa16.38■□□□□ 0.21
CLN6-211ENST00000635754 O00370 1275 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 SERPINC1P01008 464 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 SLC5A3P53794 718 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 BCAT1P54687 386 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 USP46P62068 366 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 IFRD2Q12894 506 aaPredicted RBP16.37■□□□□ 0.21
CLN6-211ENST00000635754 GPR158Q5T848 1215 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 DPY19L2P1Q6NXN4 242 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 MTSS1LQ765P7 747 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 ANKRD52Q8NB46 1076 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 MRPS31Q92665 395 aaKnown RBP16.37■□□□□ 0.21
CLN6-211ENST00000635754 SLITRK1Q96PX8 696 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 ERGIC2Q96RQ1 377 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 FAM207AQ9NSI2 230 aaPredicted RBP16.37■□□□□ 0.21
CLN6-211ENST00000635754 IGSF9Q9P2J2 1179 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 SIK3Q9Y2K2 1263 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 DAAM1Q9Y4D1 1078 aa16.37■□□□□ 0.21
CLN6-211ENST00000635754 NUP210Q8TEM1 1887 aaPredicted RBP16.37■□□□□ 0.21
CLN6-211ENST00000635754 NRG2O14511 850 aaPredicted RBP16.36■□□□□ 0.21
CLN6-211ENST00000635754 TNFRSF10BO14763 440 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 F11P03951 625 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 BRD2P25440 801 aaKnown RBP16.36■□□□□ 0.21
CLN6-211ENST00000635754 YWHAQP27348 245 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 KLK7P49862 253 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 CYP4F8P98187 520 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 BST2Q10589 180 aaKnown RBP16.36■□□□□ 0.21
CLN6-211ENST00000635754 POTEHQ6S545 545 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 LCLAT1Q6UWP7 414 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 TMEM150AQ86TG1 271 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 TFAP2BQ92481 460 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 FBXO44Q9H4M3 255 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 RTN4Q9NQC3 1192 aaKnown RBP16.36■□□□□ 0.21
CLN6-211ENST00000635754 COMMD8Q9NX08 183 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 ZMYM5Q9UJ78 669 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.36■□□□□ 0.21
CLN6-211ENST00000635754 ANAPC1Q9H1A4 1944 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 MED7O43513 233 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 SETSIPP0DME0 302 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 DDX6P26196 483 aaKnown RBP eCLIP16.36■□□□□ 0.21
CLN6-211ENST00000635754 GNA15P30679 374 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 PPP3CCP48454 512 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 ZNF445P59923 1031 aa16.36■□□□□ 0.21
CLN6-211ENST00000635754 HTR4Q13639 388 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms