RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ALDH9A1P49189 494 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 PDX1P52945 283 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 PPIL2Q13356 520 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 DDX39BQ13838 428 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 MDH1BQ5I0G3 518 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 DAB2IPQ5VWQ8 1189 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 TLK2Q86UE8 772 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 BLOC1S5Q8TDH9 187 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 CNPY3Q9BT09 278 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 MLXIPLQ9NP71 852 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 MBD2Q9UBB5 411 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 SUCOQ9UBS9 1254 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 AXIN2Q9Y2T1 843 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 A0A087WZ62 844 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 PIPSLA2A3N6 862 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 SLC26A4O43511 780 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 CYP2A7P20853 494 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 MUTP22033 750 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 GRK2P25098 689 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 TAF6P49848 677 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 GALNTL6Q49A17 601 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 RESP18Q5W5W9 173 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF746Q6NUN9 644 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 RD3Q7Z3Z2 195 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 VSTM4Q8IW00 320 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 COLGALT2Q8IYK4 626 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 IZUMO1Q8IYV9 350 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 REPS1Q96D71 796 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 GPR101Q96P66 508 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 AGPAT1Q99943 283 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 CD209Q9NNX6 404 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 MKL2Q9ULH7 1088 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 GRID1Q9ULK0 1009 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 PCDHGB3Q9Y5G1 929 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 RAD54BQ9Y620 910 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 PLEKHG1Q9ULL1 1385 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 PVALEFA0A1B0GWK0 134 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 SEC31AO94979 1220 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 AMHP03971 560 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 NDUFA5Q16718 116 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 TERB1Q8NA31 727 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 UXS1Q8NBZ7 420 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 C1orf54Q8WWF1 131 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 MAP4K1Q92918 833 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 HPDLQ96IR7 371 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 MAGED4Q96JG8 741 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 TINF2Q9BSI4 451 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 RSAD1Q9HA92 442 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 ETNK1Q9HBU6 452 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 LRRC4BQ9NT99 713 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 ABHD10Q9NUJ1 306 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 ENOPH1Q9UHY7 261 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 SMAPO00193 183 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 POLRMTO00411 1230 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 AIM2O14862 343 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 ZC3H11AO75152 810 aaKnown RBP eCLIP5.75□□□□□ -1.492e-6■□□□□ 9.4
SCN1A-209ENST00000635750 GUCY1B2O75343 617 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 SLC25A12O75746 678 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 CD2BP2O95400 341 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 STAU1O95793 577 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 POMCP01189 267 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 UMPSP11172 480 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 WARSP23381 471 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 STIP1P31948 543 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 GEMP55040 296 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 ZMYND11Q15326 602 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 EPHA7Q15375 998 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 LDHDQ86WU2 507 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 GATAD2AQ86YP4 633 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 B3GALNT2Q8NCR0 500 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 BBS4Q96RK4 519 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 KCNN2Q9H2S1 579 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 TRABDQ9H4I3 376 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 RERGLQ9H628 205 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 VTA1Q9NP79 307 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 TLR8Q9NR97 1041 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 PDGFCQ9NRA1 345 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 INTS13Q9NVM9 706 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM63CQ9P1W3 806 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 SPATA2Q9UM82 520 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 USP18Q9UMW8 372 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF232Q9UNY5 417 aa5.75□□□□□ -1.49
SCN1A-209ENST00000635750 RBM7Q9Y580 266 aaKnown RBP5.75□□□□□ -1.49
SCN1A-209ENST00000635750 LGALS16A8MUM7 142 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 MEI4A8MW99 385 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 FAM25AB3EWG3 89 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 FAM25CB3EWG5 89 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 FAM25GB3EWG6 89 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TRIM24O15164 1050 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 CNOT3O75175 753 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 SKAP2O75563 359 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 CAPN15O75808 1086 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 NPTXRO95502 500 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 DLGAP3O95886 979 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 GPD1P21695 349 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 FDFT1P37268 417 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 PTGER2P43116 358 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 NUP107P57740 925 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ACTN3Q08043 901 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms