RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 LRRC32Q14392 662 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 PPP2R5DQ14738 602 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 SMYD4Q8IYR2 804 aaPredicted RBP19.43■□□□□ 0.7
CLN6-210ENST00000635747 FAXDC2Q96IV6 333 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 ZFYVE19Q96K21 471 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 SLITRK1Q96PX8 696 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 FAM83CQ9BQN1 747 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 MED10Q9BTT4 135 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 ZNF518BQ9C0D4 1074 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 SMG9Q9H0W8 520 aaKnown RBP19.43■□□□□ 0.7
CLN6-210ENST00000635747 CHRDQ9H2X0 955 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 LMAN1LQ9HAT1 526 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 CYP3A43Q9HB55 503 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 TMEM8AQ9HCN3 771 aa19.43■□□□□ 0.7
CLN6-210ENST00000635747 KINO60870 393 aaKnown RBP19.42■□□□□ 0.7
CLN6-210ENST00000635747 RTN3O95197 1032 aaPredicted RBP19.42■□□□□ 0.7
CLN6-210ENST00000635747 TRIM49P0CI25 452 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 TRIM49CP0CI26 452 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 HDCP19113 662 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 CTHP32929 405 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 RAP1GAPP47736 663 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 GCLMP48507 274 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 FKBP3Q00688 224 aaKnown RBP19.42■□□□□ 0.7
CLN6-210ENST00000635747 PDGFRLQ15198 375 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 KRT39Q6A163 491 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 NUP93Q8N1F7 819 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 CRYBG2Q8N1P7 616 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 SMARCD1Q96GM5 515 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 GTSE1Q9NYZ3 720 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 CCL26Q9Y258 94 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 MIA3Q5JRA6 1907 aa19.42■□□□□ 0.7
CLN6-210ENST00000635747 CLDN5O00501 218 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 TCF3P15923 654 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 LRRC63Q05C16 580 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 PPP3CAQ08209 521 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 RUNX3Q13761 415 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 DGKKQ5KSL6 1271 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 MAML2Q8IZL2 1156 aaPredicted RBP19.41■□□□□ 0.7
CLN6-210ENST00000635747 PDZD8Q8NEN9 1154 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 OVCA2Q8WZ82 227 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 EXOC4Q96A65 974 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 SDCBP2Q9H190 292 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 DMAP1Q9NPF5 467 aaPredicted RBP19.41■□□□□ 0.7
CLN6-210ENST00000635747 COMMD8Q9NX08 183 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 GCNT4Q9P109 453 aa19.41■□□□□ 0.7
CLN6-210ENST00000635747 ZNF840PA6NDX5 716 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 PRR23AA6NEV1 266 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 PSMA7O14818 248 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 SLC16A3O15427 465 aaKnown RBP19.4■□□□□ 0.7
CLN6-210ENST00000635747 CHRNB1P11230 501 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 YWHAQP27348 245 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 ASPAP45381 313 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 NDST1P52848 882 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 USP46P62068 366 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 TNK2Q07912 1038 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 MTF1Q14872 753 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 SPOPLQ6IQ16 392 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 ACOT1Q86TX2 421 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 FAM35AQ86V20 835 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 ADSSL1Q8N142 457 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 SYNPOQ8N3V7 929 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 TTC39CQ8N584 583 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 KIAA1958Q8N8K9 716 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 ARL14EPQ8N8R7 260 aaPredicted RBP19.4■□□□□ 0.7
CLN6-210ENST00000635747 TAS1R2Q8TE23 839 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 CYP2S1Q96SQ9 504 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 FAM126AQ9BYI3 521 aaPredicted RBP19.4■□□□□ 0.7
CLN6-210ENST00000635747 NIF3L1Q9GZT8 377 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 MMRN2Q9H8L6 949 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 ARHGAP26Q9UNA1 814 aa19.4■□□□□ 0.7
CLN6-210ENST00000635747 TICRRQ7Z2Z1 1910 aa19.39■□□□□ 0.7
CLN6-210ENST00000635747 C2orf78A6NCI8 922 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 SOX9P48436 509 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 MXI1P50539 228 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 CCR3P51677 355 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 CACNA2D1P54289 1103 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 CSTF1Q05048 431 aaKnown RBP19.39■□□□□ 0.69
CLN6-210ENST00000635747 INCA1Q0VD86 236 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 TAF10Q12962 218 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 MTAPQ13126 283 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 ZNF77Q15935 545 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 ASCL5Q7RTU5 278 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 FBXL13Q8NEE6 735 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 TTC8Q8TAM2 541 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 ELMO3Q96BJ8 720 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 DHTKD1Q96HY7 919 aaPredicted RBP19.39■□□□□ 0.69
CLN6-210ENST00000635747 SLC22A12Q96S37 553 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 NT5C1AQ9BXI3 368 aa19.39■□□□□ 0.69
CLN6-210ENST00000635747 FAM124BQ9H5Z6 455 aaPredicted RBP19.39■□□□□ 0.69
CLN6-210ENST00000635747 PRMT8Q9NR22 394 aaPredicted RBP19.39■□□□□ 0.69
CLN6-210ENST00000635747 AP1G2O75843 785 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 ABL1P00519 1130 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 LMNAP02545 664 aaKnown RBP19.38■□□□□ 0.69
CLN6-210ENST00000635747 COL4A2P08572 1712 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 IFNAR2P48551 515 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 NRLP54845 237 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 SLC7A9P82251 487 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 COL4A3Q01955 1670 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 USP4Q13107 963 aa19.38■□□□□ 0.69
CLN6-210ENST00000635747 NR1H3Q13133 447 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms