RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 CYP11B1P15538 503 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 C4BPBP20851 252 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 FAXCQ5TGI0 409 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 ATPAF2Q8N5M1 289 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 OTUB1Q96FW1 271 aaPredicted RBP12.1□□□□□ -0.47
COL11A1-211ENST00000635193 TRIM45Q9H8W5 580 aaPredicted RBP12.1□□□□□ -0.47
COL11A1-211ENST00000635193 RABGEF1Q9UJ41 708 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 IGSF9BQ9UPX0 1349 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 CFAP99D6REC4 459 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 LAMC2Q13753 1193 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 TTMPQ5BVD1 217 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 ILDR1Q86SU0 546 aaPredicted RBP12.1□□□□□ -0.47
COL11A1-211ENST00000635193 SLC25A41Q8N5S1 370 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 ST13P5Q8NFI4 369 aaPredicted RBP12.1□□□□□ -0.47
COL11A1-211ENST00000635193 MXRA8Q9BRK3 442 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 COPG2Q9UBF2 871 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 TNS3Q68CZ2 1445 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 APOA4P06727 396 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 BGNP21810 368 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 TMEM132DQ14C87 1099 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 CALML6Q8TD86 181 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 OTULINQ96BN8 352 aa12.1□□□□□ -0.47
COL11A1-211ENST00000635193 RPAP3Q9H6T3 665 aaPredicted RBP12.1□□□□□ -0.47
COL11A1-211ENST00000635193 OVOS2A0A0J9YW53 1432 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 OVOS2Q6IE36 1432 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 TBKBP1A7MCY6 615 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 CUL2Q13617 745 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 TFDP3Q5H9I0 405 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 BRINP3Q76B58 766 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 DNAAF5Q86Y56 855 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 SPATA17Q96L03 361 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 C17orf80Q9BSJ5 609 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 DNAJC16Q9Y2G8 782 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 MSH4O15457 936 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 TFE3P19532 575 aaPredicted RBP12.09□□□□□ -0.47
COL11A1-211ENST00000635193 CCDC149Q6ZUS6 474 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 CDH24Q86UP0 819 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 PHF21AQ96BD5 680 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 LRRC39Q96DD0 335 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 KAZALD1Q96I82 304 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 SOX13Q9UN79 622 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 TAF4O00268 1085 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 PTGER2P43116 358 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 IFI35P80217 286 aaPredicted RBP12.09□□□□□ -0.47
COL11A1-211ENST00000635193 WASHC5Q12768 1159 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 GIT2Q14161 759 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 CCNG2Q16589 344 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 KIZQ2M2Z5 673 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 C2CD6Q53TS8 623 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 SPDYAQ5MJ70 313 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 C11orf63Q6NUN7 778 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 OR8H2Q8N162 312 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 TTLL6Q8N841 843 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 STKLD1Q8NE28 680 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 RIN3Q8TB24 985 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 TBX20Q9UMR3 447 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 COMMD3-BMI1R4GMX3 469 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 SYNDIG1LA6NDD5 238 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 TPD52L2O43399 206 aaKnown RBP12.09□□□□□ -0.47
COL11A1-211ENST00000635193 CSTF3Q12996 717 aaKnown RBP12.09□□□□□ -0.47
COL11A1-211ENST00000635193 KRT33BQ14525 404 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 SP8Q8IXZ3 490 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 SHCBP1Q8NEM2 672 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 UBA3Q8TBC4 463 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 NT5C1AQ9BXI3 368 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 MYLK2Q9H1R3 596 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 DMAP1Q9NPF5 467 aaPredicted RBP12.09□□□□□ -0.47
COL11A1-211ENST00000635193 GGA2Q9UJY4 613 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 MROH7Q68CQ1 1323 aa12.09□□□□□ -0.47
COL11A1-211ENST00000635193 SUPT3HB4E1H0 165 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 PIK3CDO00329 1044 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 TBC1D12O60347 775 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 PYGMP11217 842 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 RECQLP46063 649 aaPredicted RBP12.08□□□□□ -0.48
COL11A1-211ENST00000635193 MAPK11Q15759 364 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 MFSD4BQ5TF39 518 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 FBXO33Q7Z6M2 555 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 ASIC4Q96FT7 647 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 RBBP8Q99708 897 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.48
COL11A1-211ENST00000635193 PNMA3Q9UL41 463 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 CEMIPQ8WUJ3 1361 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 TMEM191CA6NGB0 347 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 H2AFYO75367 372 aaKnown RBP12.08□□□□□ -0.48
COL11A1-211ENST00000635193 TOMM70O94826 608 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 PRKCEQ02156 737 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 BOLA3Q53S33 107 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 ZNF772Q68DY9 489 aaPredicted RBP12.08□□□□□ -0.48
COL11A1-211ENST00000635193 SLC26A11Q86WA9 606 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 FBXL16Q8N461 479 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 APPL2Q8NEU8 664 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 SLC20A1Q8WUM9 679 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 MMTAG2Q9BU76 263 aaKnown RBP12.08□□□□□ -0.48
COL11A1-211ENST00000635193 USE1Q9NZ43 259 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 LMCD1Q9NZU5 365 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 MYRFQ9Y2G1 1151 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 H0YC42 278 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 AKAP3O75969 853 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 FDFT1P37268 417 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 RPL21P46778 160 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms