RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 TGM5O43548 720 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 ABLIM3O94929 683 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 ZRANB2O95218 330 aaKnown RBP eCLIP15.27■□□□□ 0.03
LINC00339-208ENST00000634934 ELF1P32519 619 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 SLC8A3P57103 927 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 DUSP4Q13115 394 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 CFAP221Q4G0U5 840 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 ADGRD2Q7Z7M1 963 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 TTC30AQ86WT1 665 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 TMTC1Q8IUR5 882 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 SCN4BQ8IWT1 228 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 GPR161Q8N6U8 529 aaKnown RBP15.27■□□□□ 0.03
LINC00339-208ENST00000634934 SPPL2BQ8TCT7 592 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 SECISBP2LQ93073 1101 aaKnown RBP15.27■□□□□ 0.03
LINC00339-208ENST00000634934 SMARCD1Q96GM5 515 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 FUBP3Q96I24 572 aaKnown RBP eCLIP15.27■□□□□ 0.03
LINC00339-208ENST00000634934 PCDHB18PQ96TA0 734 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 SEPT5Q99719 369 aaPredicted RBP15.27■□□□□ 0.03
LINC00339-208ENST00000634934 DUSP16Q9BY84 665 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 TLE6Q9H808 572 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 CYP4F11Q9HBI6 524 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 ABCB6Q9NP58 842 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 MYO1AQ9UBC5 1043 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 ADAMTS1Q9UHI8 967 aa15.27■□□□□ 0.03
LINC00339-208ENST00000634934 SOWAHDA6NJG2 315 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 PRRG1O14668 218 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 AKR1B10O60218 316 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 CLASP2O75122 1294 aaKnown RBP15.26■□□□□ 0.03
LINC00339-208ENST00000634934 VNN2O95498 520 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 GLUD1P00367 558 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 CCDC175P0C221 793 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 ATF2P15336 505 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 NPR3P17342 541 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 GRIK1P39086 918 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 CACNA2D1P54289 1103 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 BCAT1P54687 386 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 MAP3K7CLP57077 242 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 BST2Q10589 180 aaKnown RBP15.26■□□□□ 0.03
LINC00339-208ENST00000634934 MGAT5BQ3V5L5 792 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 TTC9BQ8N6N2 239 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 MAFAQ8NHW3 353 aaPredicted RBP15.26■□□□□ 0.03
LINC00339-208ENST00000634934 UBXN4Q92575 508 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 SYT11Q9BT88 431 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 CRISPLD1Q9H336 500 aa15.26■□□□□ 0.03
LINC00339-208ENST00000634934 SSU72P8A0A1W2PR75 194 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 DDX3XO00571 662 aaKnown RBP eCLIP15.25■□□□□ 0.032e-7■■□□□ 13.2
LINC00339-208ENST00000634934 SOAT2O75908 522 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 BEST1O76090 585 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 SEC24AO95486 1093 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 HAPLN1P10915 354 aaPredicted RBP15.25■□□□□ 0.03
LINC00339-208ENST00000634934 POU3F3P20264 500 aaPredicted RBP15.25■□□□□ 0.03
LINC00339-208ENST00000634934 NRIP1P48552 1158 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 PDE4CQ08493 712 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
LINC00339-208ENST00000634934 NAA30Q147X3 362 aaPredicted RBP15.25■□□□□ 0.03
LINC00339-208ENST00000634934 NAA35Q5VZE5 725 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 VSTM1Q6UX27 236 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 TRIM72Q6ZMU5 477 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 CLEC20AQ6ZU45 233 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 RSRC2Q7L4I2 434 aaKnown RBP15.25■□□□□ 0.03
LINC00339-208ENST00000634934 TMEM35BQ8NCS4 154 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 C1orf131Q8NDD1 294 aaKnown RBP15.25■□□□□ 0.03
LINC00339-208ENST00000634934 CPA5Q8WXQ8 436 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 PPP2R3CQ969Q6 453 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 KCNK16Q96T55 309 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 SMOQ99835 787 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 LHX5Q9H2C1 402 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 DMAP1Q9NPF5 467 aaPredicted RBP15.25■□□□□ 0.03
LINC00339-208ENST00000634934 TMEM30AQ9NV96 361 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 MRFAP1Q9Y605 127 aa15.25■□□□□ 0.03
LINC00339-208ENST00000634934 A0A087X0T9 212 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 TMCO5BA8MYB1 307 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 F8VP50 259 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 TULP2O00295 520 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 LSM8O95777 96 aaKnown RBP15.24■□□□□ 0.03
LINC00339-208ENST00000634934 TUBBP07437 444 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 FAM228BP0C875 321 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 SETSIPP0DME0 302 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 ANXA13P27216 316 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 GPD2P43304 727 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 MAGEA11P43364 429 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 TUFMP49411 452 aaKnown RBP15.24■□□□□ 0.03
LINC00339-208ENST00000634934 GPR15P49685 360 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 RGS7P49802 495 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 CLCN4P51793 760 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 KIF11P52732 1056 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 GFPT1Q06210 699 aaPredicted RBP15.24■□□□□ 0.03
LINC00339-208ENST00000634934 DDR2Q16832 855 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 CLEC16AQ2KHT3 1053 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 PKDCCQ504Y2 493 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 SDHAF4Q5VUM1 108 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 LLGL2Q6P1M3 1020 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 LILRA6Q6PI73 481 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 KREMEN2Q8NCW0 462 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 MNS1Q8NEH6 495 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 OLIG1Q8TAK6 271 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 NSUN3Q9H649 340 aaKnown RBP15.24■□□□□ 0.03
LINC00339-208ENST00000634934 IGFLR1Q9H665 355 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 ST7Q9NRC1 585 aa15.24■□□□□ 0.03
LINC00339-208ENST00000634934 TRIM66O15016 1216 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms