RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 CILPO75339 1184 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 RTN3O95197 1032 aaPredicted RBP16.65■□□□□ 0.26
LINC00339-207ENST00000634712 ABL1P00519 1130 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 CCDC130P13994 396 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 PPP3CCP48454 512 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 FMO5P49326 533 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 PDE6CP51160 858 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 CACNA2D1P54289 1103 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
LINC00339-207ENST00000634712 ARHGAP29Q52LW3 1261 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 ZNF394Q53GI3 561 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 TPRG1Q6ZUI0 275 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 FUKQ8N0W3 1084 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 C12orf29Q8N999 325 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 TATDN2Q93075 761 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 RSPRY1Q96DX4 576 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 CYFIP2Q96F07 1278 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 SLITRK1Q96PX8 696 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 KCNK16Q96T55 309 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 SMG9Q9H0W8 520 aaKnown RBP16.65■□□□□ 0.26
LINC00339-207ENST00000634712 HEBP1Q9NRV9 189 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 KRT82Q9NSB4 513 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 TDP1Q9NUW8 608 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 COQ4Q9Y3A0 265 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 KANSL1LA0AUZ9 987 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 PI15O43692 258 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 PRAMEF12O95522 483 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 CKMP06732 381 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 USP17L7P0C7H9 530 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 FAM200BP0CF97 657 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 YWHAQP27348 245 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 ADORA2BP29275 332 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 USP46P62068 366 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 YWHAEP62258 255 aaKnown RBP16.64■□□□□ 0.26
LINC00339-207ENST00000634712 FCHO2Q0JRZ9 810 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 UBXN2BQ14CS0 331 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 CC2D1AQ6P1N0 951 aaPredicted RBP16.64■□□□□ 0.26
LINC00339-207ENST00000634712 ZNF852Q6ZMS4 543 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 PAQR9Q6ZVX9 377 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 TTC16Q8NEE8 873 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 FAM122AQ96E09 287 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 HEXIM2Q96MH2 286 aaKnown RBP16.64■□□□□ 0.26
LINC00339-207ENST00000634712 TTLL2Q9BWV7 592 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 FAM124BQ9H5Z6 455 aaPredicted RBP16.64■□□□□ 0.26
LINC00339-207ENST00000634712 KIF9Q9HAQ2 790 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 TRPV5Q9NQA5 729 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 CISHQ9NSE2 258 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 DACH1Q9UI36 760 aa16.64■□□□□ 0.26
LINC00339-207ENST00000634712 MRPS17Q9Y2R5 130 aaKnown RBP16.64■□□□□ 0.26
LINC00339-207ENST00000634712 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.64■□□□□ 0.26
LINC00339-207ENST00000634712 PTPRDP23468 1912 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 MAN2B1O00754 1011 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 TADA3O75528 432 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 HDCP19113 662 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 KPNA1P52294 538 aaPredicted RBP16.64■□□□□ 0.25
LINC00339-207ENST00000634712 PTPN5P54829 565 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 MAP3K7CLP57077 242 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 PLCB2Q00722 1185 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 LRMPQ12912 555 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 TAF10Q12962 218 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 USP13Q92995 863 aaPredicted RBP16.64■□□□□ 0.25
LINC00339-207ENST00000634712 FBXO32Q969P5 355 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 TWNKQ96RR1 684 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 CYP2S1Q96SQ9 504 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 NELL2Q99435 816 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 HNRNPABQ99729 332 aaKnown RBP16.64■□□□□ 0.25
LINC00339-207ENST00000634712 FOXQ1Q9C009 403 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 IRF2BPLQ9H1B7 796 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 ZNF318Q5VUA4 2279 aa16.64■□□□□ 0.25
LINC00339-207ENST00000634712 ZNF638Q14966 1978 aaKnown RBP16.63■□□□□ 0.25
LINC00339-207ENST00000634712 FAM170BA6NMN3 283 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 PMM2O15305 246 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 NCAM2O15394 837 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 P4HA2O15460 535 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 GALR2O43603 387 aaPredicted RBP16.63■□□□□ 0.25
LINC00339-207ENST00000634712 DCNP07585 359 aaKnown RBP16.63■□□□□ 0.25
LINC00339-207ENST00000634712 PFKLP17858 780 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 CD72P21854 359 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 TBXAS1P24557 533 aaPredicted RBP16.63■□□□□ 0.25
LINC00339-207ENST00000634712 KCNH2Q12809 1159 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 CUL2Q13617 745 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 ZNF268Q14587 947 aaPredicted RBP16.63■□□□□ 0.25
LINC00339-207ENST00000634712 ARL14EPQ8N8R7 260 aaPredicted RBP16.63■□□□□ 0.25
LINC00339-207ENST00000634712 PDZD8Q8NEN9 1154 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 PJA1Q8NG27 643 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 WHAMMQ8TF30 809 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 TMEM176AQ96HP8 235 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 NT5C1BQ96P26 610 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 LRRC3BQ96PB8 259 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 TMEM30AQ9NV96 361 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 COMMD8Q9NX08 183 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 PIAS3Q9Y6X2 628 aa16.63■□□□□ 0.25
LINC00339-207ENST00000634712 NCANO14594 1321 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 NUP210Q8TEM1 1887 aaPredicted RBP16.62■□□□□ 0.25
LINC00339-207ENST00000634712 DENND4CQ5VZ89 1909 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 MYH10P35580 1976 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 C2orf78A6NCI8 922 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 ZNF840PA6NDX5 716 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 AFPP02771 609 aaKnown RBP16.62■□□□□ 0.25
LINC00339-207ENST00000634712 GLULP15104 373 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms