RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 ZNF180Q9UJW8 692 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SERTAD3Q9UJW9 196 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PCDHA6Q9UN73 950 aa3.59□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ISM1B1AKI9 464 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 AKAP10O43572 662 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 BMP15O95972 392 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 IGKV2-30P06310 120 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 KELP23276 732 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 UCP3P55916 312 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 KRT17Q04695 432 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 INSCQ1MX18 579 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 RUSC1-AS1Q66K80 236 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 B3GNT9Q6UX72 402 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 FBXO41Q8TF61 875 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 GLG1Q92896 1179 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 FYTTD1Q96QD9 318 aaKnown RBP3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 ZNF518BQ9C0D4 1074 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 DHX36Q9H2U1 1008 aaKnown RBP3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 BTBD3Q9Y2F9 522 aa3.58□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 TISP43B9A030 160 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 PRRT4C9JH25 899 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 PSMD9O00233 223 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 AP1G1O43747 822 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 TUSC2O75896 110 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 FESP07332 822 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 CSF1RP07333 972 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 PRR35P0CG20 571 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 KLRC1P26715 233 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 CLCN2P51788 898 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 PDE1AP54750 535 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 SUMO2P61956 95 aaKnown RBP3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 TWIST1Q15672 202 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 MTX3Q5HYI7 312 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 SLC9A4Q6AI14 798 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 ZNF782Q6ZMW2 699 aaPredicted RBP3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 CATSPERGQ6ZRH7 1159 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 MAEAQ7L5Y9 396 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 ABRAQ8N0Z2 381 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 PLBD2Q8NHP8 589 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 DENND1AQ8TEH3 1009 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 JPH3Q8WXH2 748 aaPredicted RBP3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 ZNF668Q96K58 619 aaPredicted RBP3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 ASB2Q96Q27 587 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 TAAR9Q96RI9 348 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 PPP1R9BQ96SB3 815 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 FAM118BQ9BPY3 351 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 A1CFQ9NQ94 594 aaKnown RBP3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 C1orf112Q9NSG2 853 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 GAR1Q9NY12 217 aaKnown RBP3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 TFCP2L1Q9NZI6 479 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 CACNA1IQ9P0X4 2223 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 TBC1D30Q9Y2I9 924 aa3.57□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 CYP2D7A0A087X1C5 515 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 TBC1D4O60343 1298 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 MOSPD3O75425 235 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 INMTO95050 263 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 NPR1P16066 1061 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 ENGP17813 658 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 RPL17P18621 184 aaKnown RBP3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 KCNA3P22001 575 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 EPHA3P29320 983 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 PLCD1P51178 756 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 CACNB3P54284 484 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 BCAT1P54687 386 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 SLC13A2Q13183 592 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 CCNIQ14094 377 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 NXNQ6DKJ4 435 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 C11orf87Q6NUJ2 197 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 KIRREL2Q6UWL6 708 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 ZNF813Q6ZN06 617 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 SKAP1Q86WV1 359 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 KRT73Q86Y46 540 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 IZUMO1Q8IYV9 350 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 SIRT6Q8N6T7 355 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 DNAJC5GQ8N7S2 189 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 TERB1Q8NA31 727 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 PCSK9Q8NBP7 692 aaKnown RBP3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 NGDNQ8NEJ9 315 aaKnown RBP3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 SMCR8Q8TEV9 937 aaPredicted RBP3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 DDB2Q92466 427 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 NMD3Q96D46 503 aaKnown RBP3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 DPCDQ9BVM2 203 aaPredicted RBP3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 BHMT2Q9H2M3 363 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 FAM83DQ9H4H8 585 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 CXorf36Q9H7Y0 433 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 TUBA8Q9NY65 449 aaPredicted RBP3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 MAFFQ9ULX9 164 aa3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.56□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 CAPN8A6NHC0 703 aa3.55□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 BTN3A1O00481 513 aa3.55□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 CYP4F2P78329 520 aa3.55□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 FHL1Q13642 323 aa3.55□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 ZNF267Q14586 743 aaPredicted RBP3.55□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 TRIP6Q15654 476 aaKnown RBP3.55□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 MINDY4Q4G0A6 757 aa3.55□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 ZNF626Q68DY1 528 aa3.55□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 MZT2AQ6P582 158 aa3.55□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 ZNF517Q6ZMY9 492 aaPredicted RBP3.55□□□□□ -1.84
NPHP3-ACAD11-202ENST00000632629 EPM2AIP1Q7L775 607 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms