RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 VKORC1Q9BQB6 163 aa4.33□□□□□ -1.72
CHD2-219ENST00000630016 CALCOCO1Q9P1Z2 691 aa4.33□□□□□ -1.72
CHD2-219ENST00000630016 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.33□□□□□ -1.72
CHD2-219ENST00000630016 CNTNAP2Q9UHC6 1331 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 K7ESF4 209 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 NTN1O95631 604 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 EYA4O95677 639 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 CHEK2O96017 543 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 RPLP2P05387 115 aaKnown RBP4.32□□□□□ -1.72
CHD2-219ENST00000630016 GNAI3P08754 354 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 FAM163BP0C2L3 166 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 PCSK6P29122 969 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
CHD2-219ENST00000630016 GNAI1P63096 354 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 TLE1Q04724 770 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 KLF1Q13351 362 aaPredicted RBP4.32□□□□□ -1.72
CHD2-219ENST00000630016 LAMB3Q13751 1172 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 KLHL22Q53GT1 634 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 AARS2Q5JTZ9 985 aaKnown RBP4.32□□□□□ -1.72
CHD2-219ENST00000630016 RBM20Q5T481 1227 aaKnown RBP4.32□□□□□ -1.72
CHD2-219ENST00000630016 ZNF618Q5T7W0 954 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 GIMAP6Q6P9H5 292 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 NOP9Q86U38 636 aaKnown RBP4.32□□□□□ -1.72
CHD2-219ENST00000630016 PSD4Q8NDX1 1056 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 KLHDC4Q8TBB5 520 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 COG1Q8WTW3 980 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 FAM136AQ96C01 138 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 REPS1Q96D71 796 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 HMCESQ96FZ2 354 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 MRGPRX4Q96LA9 322 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 SH2D3AQ9BRG2 576 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 CNPPD1Q9BV87 410 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 QTRT1Q9BXR0 403 aaKnown RBP4.32□□□□□ -1.72
CHD2-219ENST00000630016 AMBRA1Q9C0C7 1298 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 PRDM11Q9NQV5 511 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 MAN1C1Q9NR34 630 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 RLIMQ9NVW2 624 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 TUBA8Q9NY65 449 aaPredicted RBP4.32□□□□□ -1.72
CHD2-219ENST00000630016 ELOVL5Q9NYP7 299 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 THSD7AQ9UPZ6 1657 aa4.32□□□□□ -1.72
CHD2-219ENST00000630016 CPDO75976 1380 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 KIF1BO60333 1816 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 TRIM75PA6NK02 468 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 ZNF785A8K8V0 405 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 TISP43B9A030 160 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 NDUFS2O75306 463 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 TOP3BO95985 862 aaKnown RBP4.31□□□□□ -1.72
CHD2-219ENST00000630016 CD6P30203 668 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 ALDH9A1P49189 494 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 FOXG1P55316 489 aaPredicted RBP4.31□□□□□ -1.72
CHD2-219ENST00000630016 CCDC93Q567U6 631 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 RNF219Q5W0B1 726 aaPredicted RBP4.31□□□□□ -1.72
CHD2-219ENST00000630016 AWAT2Q6E213 333 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 SLC2A7Q6PXP3 512 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 LHFPL2Q6ZUX7 228 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 CLPTM1LQ96KA5 538 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 ADGRE3Q9BY15 652 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 SIK2Q9H0K1 926 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 VPS16Q9H269 839 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 GNL3LQ9NVN8 582 aaKnown RBP4.31□□□□□ -1.72
CHD2-219ENST00000630016 ETAA1Q9NY74 926 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 CFAP97Q9P2B7 532 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 DKK3Q9UBP4 350 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 RGPD3A6NKT7 1758 aaPredicted RBP4.31□□□□□ -1.72
CHD2-219ENST00000630016 RGPD4Q7Z3J3 1758 aa4.31□□□□□ -1.72
CHD2-219ENST00000630016 YTHDC2Q9H6S0 1430 aaKnown RBP4.3□□□□□ -1.72
CHD2-219ENST00000630016 H0YIZ8 118 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 MYO1FO00160 1098 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 QSOX1O00391 747 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 JUPP14923 745 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 HSPA6P17066 643 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 LPOP22079 712 aaPredicted RBP4.3□□□□□ -1.72
CHD2-219ENST00000630016 TKTP29401 623 aaKnown RBP4.3□□□□□ -1.72
CHD2-219ENST00000630016 CNGA1P29973 690 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 CCKBRP32239 447 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 PSMC1P62191 440 aaKnown RBP4.3□□□□□ -1.72
CHD2-219ENST00000630016 SLC15A2Q16348 729 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 PXDC1Q5TGL8 231 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 TAF2Q6P1X5 1199 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 WDR53Q7Z5U6 358 aaPredicted RBP4.3□□□□□ -1.72
CHD2-219ENST00000630016 CNGA4Q8IV77 575 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 SMOC2Q9H3U7 446 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 BRD9Q9H8M2 597 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 SIDT1Q9NXL6 827 aaKnown RBP4.3□□□□□ -1.72
CHD2-219ENST00000630016 STK32BQ9NY57 414 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 TUBD1Q9UJT1 453 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.3□□□□□ -1.72
CHD2-219ENST00000630016 CHD4Q14839 1912 aa4.3□□□□□ -1.72
CHD2-219ENST00000630016 OVOS2A0A0G2JMS6 1433 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 OVOS2A0A0J9YW53 1432 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 OVOS2Q6IE36 1432 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 TNS1Q9HBL0 1735 aaKnown RBP4.29□□□□□ -1.72
CHD2-219ENST00000630016 FMN2Q9NZ56 1722 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 PLCH1Q4KWH8 1693 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 RREB1Q92766 1687 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 KCNU1A8MYU2 1149 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 PRRT4C9JH25 899 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 INSIG1O15503 277 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 DNAJB5O75953 348 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 NHLRC4P0CG21 123 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms