RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CTXN3Q4LDR2 81 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 HERC6Q8IVU3 1022 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 EMILIN2Q9BXX0 1053 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 MRGBPQ9NV56 204 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 UBQLN1Q9UMX0 589 aaKnown RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 USP15Q9Y4E8 981 aaPredicted RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 DEAF1O75398 565 aaPredicted RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 FDFT1P37268 417 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 ANXA11P50995 505 aaKnown RBP12.18□□□□□ -0.46
SHPRH-211ENST00000629427 TERF2Q15554 542 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 MRNIPQ6NTE8 343 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 XRRA1Q6P2D8 792 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 CCDC81Q6ZN84 652 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 CNPY4Q8N129 248 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 MANSC1Q9H8J5 431 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 KLC4Q9NSK0 619 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 FBXO28Q9NVF7 368 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 LNPEPQ9UIQ6 1025 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 PLA2G4CQ9UP65 541 aa12.18□□□□□ -0.46
SHPRH-211ENST00000629427 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.17□□□□□ -0.46
SHPRH-211ENST00000629427 CACHD1Q5VU97 1274 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 EFL1Q7Z2Z2 1120 aaKnown RBP12.17□□□□□ -0.46
SHPRH-211ENST00000629427 ZNF711Q9Y462 761 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 A0A1B0GTH6 734 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 CASTOR2A6NHX0 329 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 EZH2Q15910 746 aaKnown RBP12.17□□□□□ -0.46
SHPRH-211ENST00000629427 RBBP8Q99708 897 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 VPS33BQ9H267 617 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 MTO1Q9Y2Z2 717 aaKnown RBP12.17□□□□□ -0.46
SHPRH-211ENST00000629427 RNF103O00237 685 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 TOMM70O94826 608 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 EPHX2P34913 555 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 NR1I3Q14994 352 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 EDRF1Q3B7T1 1238 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 SLFN11Q7Z7L1 901 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 ZNF34Q8IZ26 560 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 SGF29Q96ES7 293 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 CCDC3Q9BQI4 270 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 STARD7Q9NQZ5 370 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 SMARCAL1Q9NZC9 954 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 VPS26AO75436 327 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 RAP1GAPP47736 663 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 FXR2P51116 673 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHPRH-211ENST00000629427 GEMP55040 296 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 EFEMP1Q12805 493 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 CERKQ8TCT0 537 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 SLC24A3Q9HC58 644 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 PADI4Q9UM07 663 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 WBP4O75554 376 aaKnown RBP12.17□□□□□ -0.46
SHPRH-211ENST00000629427 ZNF286BP0CG31 522 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 MYL4P12829 197 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 MAPK9P45984 424 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 VSNL1P62760 191 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 CYP51A1Q16850 503 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 ARMC2Q8NEN0 867 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 IRX2Q9BZI1 471 aaPredicted RBP12.17□□□□□ -0.46
SHPRH-211ENST00000629427 UBXN6Q9BZV1 441 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 DMAP1Q9NPF5 467 aaPredicted RBP12.17□□□□□ -0.46
SHPRH-211ENST00000629427 ALG6Q9Y672 507 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 SPATA31A1Q5TZJ5 1347 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 HOXA2O43364 376 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 SUPT7LO94864 414 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 ALDH2P05091 517 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 RASGRP2Q7LDG7 609 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 CCDC60Q8IWA6 550 aaPredicted RBP12.17□□□□□ -0.46
SHPRH-211ENST00000629427 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHPRH-211ENST00000629427 ADARB2Q9NS39 739 aaKnown RBP12.17□□□□□ -0.46
SHPRH-211ENST00000629427 RPS6KB2Q9UBS0 482 aa12.17□□□□□ -0.46
SHPRH-211ENST00000629427 RAD51CO43502 376 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 CLCN3P51790 818 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 GEMIN4P57678 1058 aaKnown RBP12.16□□□□□ -0.46
SHPRH-211ENST00000629427 CSTF3Q12996 717 aaKnown RBP12.16□□□□□ -0.46
SHPRH-211ENST00000629427 ZNF484Q5JVG2 852 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 KCTD17Q8N5Z5 321 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 MED8Q96G25 268 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 DYRK1BQ9Y463 629 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 RPS6KL1Q9Y6S9 549 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 CNTNAP5Q8WYK1 1306 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 CAMSAP1Q5T5Y3 1602 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 GSTM1P09488 218 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 PDIA6Q15084 440 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 SPATA31A6Q5VVP1 1343 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 ZNF473Q8WTR7 871 aaKnown RBP12.16□□□□□ -0.46
SHPRH-211ENST00000629427 RIN2Q8WYP3 895 aaPredicted RBP12.16□□□□□ -0.46
SHPRH-211ENST00000629427 ZNF333Q96JL9 665 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 ADGRE3Q9BY15 652 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 CLPBQ9H078 707 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 PPCSQ9HAB8 311 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 GPRC5CQ9NQ84 441 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 VPS28Q9UK41 221 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 TRPC5OSA6NMA1 111 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 C9orf131Q5VYM1 1079 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 ARHGAP17Q68EM7 881 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 MMGT1Q8N4V1 131 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 AGBL3Q8NEM8 1001 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 OR2W6PQ8NHA6 318 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 E2F7Q96AV8 911 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 MAGED4Q96JG8 741 aa12.16□□□□□ -0.46
SHPRH-211ENST00000629427 RERGLQ9H628 205 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms