RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ZC3H3Q8IXZ2 948 aaKnown RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 KCTD17Q8N5Z5 321 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 TMEM40Q8WWA1 233 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 MAIP1Q8WWC4 291 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 SMC6Q96SB8 1091 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 PTPN18Q99952 460 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 CYTH4Q9UIA0 394 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 SNX10Q9Y5X0 201 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 POLR2AP24928 1970 aaKnown RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 CNTNAP2Q9UHC6 1331 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 CYB561D2O14569 222 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 HSPA6P17066 643 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 MMP8P22894 467 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 HSPA9P38646 679 aaKnown RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 ARL4AP40617 200 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 RAD23BP54727 409 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 PPP2R5EQ16537 467 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 HIBCHQ6NVY1 386 aaPredicted RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 CENPUQ71F23 418 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 MON1BQ7L1V2 547 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 PID1Q7Z2X4 250 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 SRLQ86TD4 932 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 MYCBPAPQ8TBZ2 947 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 USP6NLQ92738 828 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 CAVIN3Q969G5 261 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 TRAIPQ9BWF2 469 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 NIFKQ9BYG3 293 aaKnown RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 SIX4Q9UIU6 781 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 COL11A2P13942 1736 aaPredicted RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.85□□□□□ -1.15
PKP4-217ENST00000628904 ADCY6O43306 1168 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 MMP3P08254 477 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 GPD1P21695 349 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 BRCC3P46736 316 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 SESN3P58005 492 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 MXRA7P84157 204 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 ROR1Q01973 937 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 PTGISQ16647 500 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 FBXO47Q5MNV8 452 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 MROH9Q5TGP6 573 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 DENND5BQ6ZUT9 1274 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 SLFN11Q7Z7L1 901 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 B3GALT6Q96L58 329 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 KCNK16Q96T55 309 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 ABI2Q9NYB9 513 aaPredicted RBP7.85□□□□□ -1.15
PKP4-217ENST00000628904 STRIP2Q9ULQ0 834 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.85□□□□□ -1.15
PKP4-217ENST00000628904 TSPAN1O60635 241 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 LRCH4O75427 683 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 CPP00450 1065 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 KRT7P08729 469 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 USP17L7P0C7H9 530 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 ATP2A2P16615 1042 aaKnown RBP7.85□□□□□ -1.15
PKP4-217ENST00000628904 TPH1P17752 444 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 RBL1P28749 1068 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 SLC1A1P43005 524 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 FLT3LGP49771 235 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 CENPCQ03188 943 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 OLIG2Q13516 323 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 RCN2Q14257 317 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 TAF12Q16514 161 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 FSCN1Q16658 493 aaKnown RBP7.85□□□□□ -1.15
PKP4-217ENST00000628904 CA9Q16790 459 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 C6orf118Q5T5N4 469 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 ANKRD22Q5VYY1 191 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 TRIM72Q6ZMU5 477 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 MIB1Q86YT6 1006 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 C12orf56Q8IXR9 622 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 RCOR2Q8IZ40 523 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 FBXO36Q8NEA4 188 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 PIK3R5Q8WYR1 880 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 RUNDC3BQ96NL0 473 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 TGS1Q96RS0 853 aaKnown RBP7.85□□□□□ -1.15
PKP4-217ENST00000628904 SHCBP1LQ9BZQ2 653 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.85□□□□□ -1.153e-13■■■■□ 21.8
PKP4-217ENST00000628904 KLHL8Q9P2G9 620 aaPredicted RBP7.85□□□□□ -1.15
PKP4-217ENST00000628904 NAALADL1Q9UQQ1 740 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 NCANO14594 1321 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 C17orf102A2RUQ5 167 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 DFFAO00273 331 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 SPTLC1O15269 473 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 FAM155BO75949 473 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 MYBL1P10243 752 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 KRT4P19013 534 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 CD52P31358 61 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 ASPAP45381 313 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 OR1G1P47890 313 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 PDE1BQ01064 536 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 ITIH3Q06033 890 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 PIGHQ14442 188 aaPredicted RBP7.85□□□□□ -1.15
PKP4-217ENST00000628904 PKN2Q16513 984 aaKnown RBP7.85□□□□□ -1.15
PKP4-217ENST00000628904 ZNF484Q5JVG2 852 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 ABI1Q8IZP0 508 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 SLC4A11Q8NBS3 891 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 DDX27Q96GQ7 796 aaKnown RBP7.85□□□□□ -1.15
PKP4-217ENST00000628904 FBXL18Q96ME1 805 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 FAM193BQ96PV7 902 aaPredicted RBP7.85□□□□□ -1.15
PKP4-217ENST00000628904 LGMNQ99538 433 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 PAAF1Q9BRP4 392 aa7.85□□□□□ -1.15
PKP4-217ENST00000628904 STMN4Q9H169 189 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms