RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 RAP1GAPP47736 663 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 NEK2P51955 445 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 CCDC15Q0P6D6 951 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 TTLL9Q3SXZ7 439 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 CCDC33Q8N5R6 958 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 FAM172AQ8WUF8 416 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 GMCL1Q96IK5 515 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 ASS1P00966 412 aaKnown RBP13.28□□□□□ -0.28
SCN8A-209ENST00000627620 APOA4P06727 396 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 TOB1P50616 345 aaPredicted RBP13.28□□□□□ -0.28
SCN8A-209ENST00000627620 HPCAP84074 193 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 SKOR1P84550 965 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 POLD3Q15054 466 aaPredicted RBP13.28□□□□□ -0.28
SCN8A-209ENST00000627620 TFDP3Q5H9I0 405 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 AGAP9Q5VTM2 703 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 PCNX4Q63HM2 1172 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 SLFN11Q7Z7L1 901 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 C11orf96Q7Z7L8 435 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 COL23A1Q86Y22 540 aaPredicted RBP13.28□□□□□ -0.28
SCN8A-209ENST00000627620 REXO1L1PQ8IX06 675 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 FBXO36Q8NEA4 188 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 GPATCH2LQ9NWQ4 482 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 SPASTQ9UBP0 616 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 AAR2Q9Y312 384 aaKnown RBP13.28□□□□□ -0.28
SCN8A-209ENST00000627620 V9GYQ6 96 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 PTPRMP28827 1452 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 TECPR2O15040 1411 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 VWA5AO00534 786 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 HNRNPRO43390 633 aaKnown RBP13.28□□□□□ -0.28
SCN8A-209ENST00000627620 F9P00740 461 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 IRAK1P51617 712 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 ARMC6Q6NXE6 501 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 ADCK1Q86TW2 530 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 LRRC6Q86X45 466 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 PACSIN1Q9BY11 444 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 SHCBP1LQ9BZQ2 653 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 KBTBD4Q9NVX7 518 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 TMX2Q9Y320 296 aa13.28□□□□□ -0.28
SCN8A-209ENST00000627620 GYS1P13807 737 aa13.27□□□□□ -0.28
SCN8A-209ENST00000627620 BTNL9Q6UXG8 535 aa13.27□□□□□ -0.28
SCN8A-209ENST00000627620 USP13Q92995 863 aaPredicted RBP13.27□□□□□ -0.28
SCN8A-209ENST00000627620 RBBP8Q99708 897 aa13.27□□□□□ -0.28
SCN8A-209ENST00000627620 PABPC3Q9H361 631 aaKnown RBP13.27□□□□□ -0.28
SCN8A-209ENST00000627620 HPS4Q9NQG7 708 aa13.27□□□□□ -0.28
SCN8A-209ENST00000627620 PXMP2Q9NR77 195 aa13.27□□□□□ -0.28
SCN8A-209ENST00000627620 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.27□□□□□ -0.28
SCN8A-209ENST00000627620 H2AFY2Q9P0M6 372 aaPredicted RBP13.27□□□□□ -0.28
SCN8A-209ENST00000627620 ZNF229Q9UJW7 825 aa13.27□□□□□ -0.28
SCN8A-209ENST00000627620 PTGISQ16647 500 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 DENND1BQ6P3S1 775 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 PHF21AQ96BD5 680 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 ZNF518BQ9C0D4 1074 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 ILKAPQ9H0C8 392 aaPredicted RBP13.27□□□□□ -0.29
SCN8A-209ENST00000627620 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.27□□□□□ -0.29
SCN8A-209ENST00000627620 KDM1AO60341 852 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 MBL2P11226 248 aaPredicted RBP13.27□□□□□ -0.29
SCN8A-209ENST00000627620 BTKQ06187 659 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 TMEM132BQ14DG7 1078 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 TTI2Q6NXR4 508 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 PLD3Q8IV08 490 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 SAMD3Q8N6K7 520 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 TNIP2Q8NFZ5 429 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 HES6Q96HZ4 224 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 DUSP10Q9Y6W6 482 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 SUPT7LO94864 414 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 BCAT1P54687 386 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.29
SCN8A-209ENST00000627620 CENPPQ6IPU0 288 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 NYAP1Q6ZVC0 841 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 ZNF720Q7Z2F6 126 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 TMC2Q8TDI7 906 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 EHD4Q9H223 541 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 E9PCH4 1651 aa13.27□□□□□ -0.29
SCN8A-209ENST00000627620 SDR42E2A6NKP2 422 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 GLRA3O75311 464 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 EPB42P16452 691 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 OVGP1Q12889 678 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 ATP8B4Q8TF62 1192 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 DTNAQ9Y4J8 743 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 NFIBO00712 420 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 RAP1GDS1P52306 607 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 TXNRD3Q86VQ6 643 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 CCNJLQ8IV13 435 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 UNC45BQ8IWX7 931 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 TAS1R2Q8TE23 839 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 EPS8L3Q8TE67 593 aaKnown RBP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 ANKRD7Q92527 254 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 AGO4Q9HCK5 861 aaKnown RBP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 NMRK2Q9NPI5 230 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 RNF112Q9ULX5 631 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 hCG_2014768A0A024R1R8 64 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 DDTLA6NHG4 134 aaPredicted RBP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 CCND1P24385 295 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 CYP24A1Q07973 514 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 PAN2Q504Q3 1202 aaKnown RBP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 TIGD7Q6NT04 549 aaPredicted RBP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 DCDC2Q9UHG0 476 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 GZMAP12544 262 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 GCLCP48506 637 aaPredicted RBP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 COPAP53621 1224 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms