RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 NPR3P17342 541 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 CHRNA3P32297 505 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 CXCR5P32302 372 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 PCK1P35558 622 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 ABL2P42684 1182 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 RPL34P49207 117 aaKnown RBP9.09□□□□□ -0.95
CHD2-211ENST00000627460 LMNB2Q03252 620 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 DSC1Q08554 894 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 DHX34Q14147 1143 aaKnown RBP9.09□□□□□ -0.95
CHD2-211ENST00000627460 IKBKEQ14164 716 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 PTPN20Q4JDL3 420 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 PKDCCQ504Y2 493 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 FAM102AQ5T9C2 384 aaPredicted RBP9.09□□□□□ -0.95
CHD2-211ENST00000627460 CNKSR3Q6P9H4 555 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 TMCO3Q6UWJ1 677 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 XYLT1Q86Y38 959 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 IFT20Q8IY31 132 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 KATNAL2Q8IYT4 538 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 RCOR2Q8IZ40 523 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 DCP1BQ8IZD4 617 aaKnown RBP9.09□□□□□ -0.95
CHD2-211ENST00000627460 WDTC1Q8N5D0 677 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 DBF4BQ8NFT6 615 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 SLC35F5Q8WV83 523 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 HNRNPLLQ8WVV9 542 aaKnown RBP9.09□□□□□ -0.95
CHD2-211ENST00000627460 KCTD13Q8WZ19 329 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 LPPQ93052 612 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 SMARCD1Q96GM5 515 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 MCEEQ96PE7 176 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 PSMB7Q99436 277 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 SYT15Q9BQS2 421 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 CNPY3Q9BT09 278 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 DUSP16Q9BY84 665 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 FRMD8P1Q9BZ68 369 aaPredicted RBP9.09□□□□□ -0.95
CHD2-211ENST00000627460 FAM129AQ9BZQ8 928 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 RAB17Q9H0T7 212 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 ACBD3Q9H3P7 528 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 C11orf49Q9H6J7 331 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 GOLGA2P5Q9HBQ8 144 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 ARFGAP3Q9NP61 516 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 RRN3Q9NYV6 651 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 HMGXB4Q9UGU5 601 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 RAB21Q9UL25 225 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 PACSIN2Q9UNF0 486 aaPredicted RBP9.09□□□□□ -0.95
CHD2-211ENST00000627460 EFR3BQ9Y2G0 817 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 INPP5FQ9Y2H2 1132 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 TRIP11Q15643 1979 aa9.09□□□□□ -0.95
CHD2-211ENST00000627460 TDRD15B5MCY1 1934 aaKnown RBP9.08□□□□□ -0.96
CHD2-211ENST00000627460 ABHD14A-ACY1A0A1B0GW23 586 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 TCRBV5S1A1TA0A578 114 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 CASTOR2A6NHX0 329 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 ENPP3O14638 875 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 NBNO60934 754 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 ZNF189O75820 626 aaPredicted RBP9.08□□□□□ -0.96
CHD2-211ENST00000627460 FGGP02679 453 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 ALDH2P05091 517 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 CLTBP09497 229 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 GPD1P21695 349 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 PSMA2P25787 234 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 SDC4P31431 198 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 PTPN7P35236 360 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 RDXP35241 583 aaKnown RBP9.08□□□□□ -0.96
CHD2-211ENST00000627460 SSR1P43307 286 aaKnown RBP9.08□□□□□ -0.96
CHD2-211ENST00000627460 FNTAP49354 379 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 PEX5P50542 639 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 DNA2P51530 1060 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 ZNF143P52747 638 aaPredicted RBP9.08□□□□□ -0.96
CHD2-211ENST00000627460 SLC6A3Q01959 620 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 YWHAHQ04917 246 aaPredicted RBP9.08□□□□□ -0.96
CHD2-211ENST00000627460 SMC1AQ14683 1233 aaKnown RBP9.08□□□□□ -0.96
CHD2-211ENST00000627460 MBTPS1Q14703 1052 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 NFE2Q16621 373 aaPredicted RBP9.08□□□□□ -0.96
CHD2-211ENST00000627460 ZFYVE27Q5T4F4 411 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 WSCD1Q658N2 575 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 OVOS1Q6IE37 1185 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 OR6B2Q6IFH4 312 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 CC2D1AQ6P1N0 951 aaPredicted RBP9.08□□□□□ -0.96
CHD2-211ENST00000627460 SLC26A9Q7LBE3 791 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 NECAB2Q7Z6G3 386 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 VSIG1Q86XK7 387 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 DNAAF5Q86Y56 855 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 MAP7D3Q8IWC1 876 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 LRRC43Q8N309 656 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 MYCBPAPQ8TBZ2 947 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 GRK7Q8WTQ7 553 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 LRRN4Q8WUT4 740 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 CPXM1Q96SM3 734 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 TBCBQ99426 244 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 MED10Q9BTT4 135 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 PRR14Q9BWN1 585 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 PRDM16Q9HAZ2 1276 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 LRRC4Q9HBW1 653 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 FAM49BQ9NUQ9 324 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 TMEM39AQ9NV64 488 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 STIM2Q9P246 746 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 TMEM59LQ9UK28 342 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 STAP1Q9ULZ2 295 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 TANC1Q9C0D5 1861 aa9.08□□□□□ -0.96
CHD2-211ENST00000627460 SF3B1O75533 1304 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD2-211ENST00000627460 SCN1AP35498 2009 aa9.07□□□□□ -0.96
CHD2-211ENST00000627460 FAM187AA6NFU0 413 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms