RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TMEM130Q8N3G9 435 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 XXYLT1Q8NBI6 393 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 FEZF2Q8TBJ5 459 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 FAM200AQ8TCP9 573 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 PGLYRP2Q96PD5 576 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 CORO1BQ9BR76 489 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 KCNK12Q9HB15 430 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 PDE11AQ9HCR9 933 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 C11orf16Q9NQ32 467 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 AGPAT3Q9NRZ7 376 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 EPS15L1Q9UBC2 864 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 CDH7Q9ULB5 785 aa6.88□□□□□ -1.31
TCF4-249ENST00000625716 MRPS23Q9Y3D9 190 aaKnown RBP6.88□□□□□ -1.31
TCF4-249ENST00000625716 SPTBN5Q9NRC6 3674 aaKnown RBP6.88□□□□□ -1.31
TCF4-249ENST00000625716 C9orf172C9J069 976 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 EXOC3O60645 756 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 N4BP1O75113 896 aaKnown RBP6.87□□□□□ -1.31
TCF4-249ENST00000625716 PHACTR2O75167 634 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 MICAL2O94851 1124 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 ZNF202O95125 648 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 SEC24AO95486 1093 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 RPN1P04843 607 aaKnown RBP6.87□□□□□ -1.31
TCF4-249ENST00000625716 CYP11A1P05108 521 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 RHOP08100 348 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 OR4Q2P0C623 313 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 DLATP10515 647 aaKnown RBP6.87□□□□□ -1.31
TCF4-249ENST00000625716 TUFMP49411 452 aaKnown RBP6.87□□□□□ -1.31
TCF4-249ENST00000625716 NTHL1P78549 312 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 MYL7Q01449 175 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 TSPY1Q01534 308 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 TWF1Q12792 350 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 SMARCB1Q12824 385 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 DUSP4Q13115 394 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 GPR17Q13304 367 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 SNRNP35Q16560 246 aaKnown RBP6.87□□□□□ -1.31
TCF4-249ENST00000625716 SLC39A12Q504Y0 691 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 PERM1Q5SV97 790 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 LMBRD2Q68DH5 695 aaPredicted RBP6.87□□□□□ -1.31
TCF4-249ENST00000625716 KRBA2Q6ZNG9 492 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 HFE2Q6ZVN8 426 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 BMP8AQ7Z5Y6 402 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 CBWD2Q8IUF1 395 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 WDR49Q8IV35 697 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 EFCAB13Q8IY85 973 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 DCP1BQ8IZD4 617 aaKnown RBP6.87□□□□□ -1.31
TCF4-249ENST00000625716 FMR1NBQ8N0W7 255 aaPredicted RBP6.87□□□□□ -1.31
TCF4-249ENST00000625716 TMEM86AQ8N2M4 240 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 FBXL6Q8N531 539 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 LRRC52Q8N7C0 313 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 LEMD2Q8NC56 503 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 GLIS3Q8NEA6 775 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 ZSWIM2Q8NEG5 633 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 SCFD1Q8WVM8 642 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 FGF13Q92913 245 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 MYO19Q96H55 970 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 CHAMP1Q96JM3 812 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 MYADMQ96S97 322 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 LPIN3Q9BQK8 851 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 MTMR12Q9C0I1 747 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 ASAH2Q9NR71 780 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 INTS13Q9NVM9 706 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 HCFC1R1Q9NWW0 138 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 DNMT3BQ9UBC3 853 aaKnown RBP6.87□□□□□ -1.31
TCF4-249ENST00000625716 HOOK1Q9UJC3 728 aaKnown RBP6.87□□□□□ -1.31
TCF4-249ENST00000625716 HPSEQ9Y251 543 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 INSL5Q9Y5Q6 135 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 MYH15Q9Y2K3 1946 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 XIRP2A4UGR9 3374 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 CUL9Q8IWT3 2517 aa6.87□□□□□ -1.31
TCF4-249ENST00000625716 TTC28Q96AY4 2481 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 FAM237AA0A1B0GTK4 181 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 PDXKO00764 312 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 TGFB1I1O43294 461 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 CALUO43852 315 aaPredicted RBP6.86□□□□□ -1.31
TCF4-249ENST00000625716 SASH3O75995 380 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 MYL4P12829 197 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 HOXD13P35453 343 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 LHX1P48742 406 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 AP3M2P53677 418 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 CYP24A1Q07973 514 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 EHHADHQ08426 723 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 STK4Q13043 487 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 TRPC3Q13507 836 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 VEPH1Q14D04 833 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 BMT2Q1RMZ1 405 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 C11orf91Q3C1V1 193 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 MGAT5BQ3V5L5 792 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 WSCD1Q658N2 575 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 ITIH5Q86UX2 942 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 C12orf56Q8IXR9 622 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 SLC44A3Q8N4M1 653 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 TOP6BLQ8N6T0 577 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 C1orf127Q8N9H9 656 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 ITFG1Q8TB96 612 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 C2orf15Q8WU43 125 aaKnown RBP6.86□□□□□ -1.31
TCF4-249ENST00000625716 RSAD2Q8WXG1 361 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 ING5Q8WYH8 240 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 CCDC127Q96BQ5 260 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 FAM122AQ96E09 287 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms