RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 STK38Q15208 465 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 MDH1BQ5I0G3 518 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 TCEAL6Q6IPX3 200 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 MYCBPAPQ8TBZ2 947 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 TCEAL3Q969E4 200 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 CHAMP1Q96JM3 812 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 EDEM2Q9BV94 578 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 TTLL2Q9BWV7 592 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 TRIM9Q9C026 710 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 DUSP15Q9H1R2 295 aaPredicted RBP15.45■□□□□ 0.06
TUBB3-215ENST00000625617 SNX25Q9H3E2 840 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 CUEDC2Q9H467 287 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 ZSCAN16Q9H4T2 348 aaPredicted RBP15.45■□□□□ 0.06
TUBB3-215ENST00000625617 ANGPTL2Q9UKU9 493 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 MTMR6Q9Y217 621 aa15.45■□□□□ 0.06
TUBB3-215ENST00000625617 OBSL1O75147 1896 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 F8VP50 259 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 LEFTY2O00292 366 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 TM4SF5O14894 197 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 PMLP29590 882 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 OPRD1P41143 372 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 SEC13P55735 322 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 TNNC1P63316 161 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 NOP14P78316 857 aaKnown RBP15.44■□□□□ 0.06
TUBB3-215ENST00000625617 SNRNP35Q16560 246 aaKnown RBP15.44■□□□□ 0.06
TUBB3-215ENST00000625617 FAM26FQ5R3K3 315 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 RNF43Q68DV7 783 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 TRAPPC11Q7Z392 1133 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 C11orf74Q86VG3 221 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 USP33Q8TEY7 942 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 FNBP1Q96RU3 617 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 CGRRF1Q99675 332 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 MRPL45Q9BRJ2 306 aaKnown RBP15.44■□□□□ 0.06
TUBB3-215ENST00000625617 LINC00597Q9H2U6 94 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 AGPAT3Q9NRZ7 376 aa15.44■□□□□ 0.06
TUBB3-215ENST00000625617 UBE4BO95155 1302 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 ZNF840PA6NDX5 716 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 SLC9A3R1O14745 358 aaPredicted RBP15.43■□□□□ 0.06
TUBB3-215ENST00000625617 TACC1O75410 805 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 CAVIN2O95810 425 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 CYP17A1P05093 508 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 TNNI1P19237 187 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 HOXD13P35453 343 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 PPP3CCP48454 512 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 CYP2J2P51589 502 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 SLC7A9P82251 487 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 ZXDBP98169 803 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 AMPD3Q01432 767 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 E2F4Q16254 413 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 USP39Q53GS9 565 aaKnown RBP15.43■□□□□ 0.06
TUBB3-215ENST00000625617 C2orf27AQ580R0 203 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 N4BP2L1Q5TBK1 243 aaPredicted RBP15.43■□□□□ 0.06
TUBB3-215ENST00000625617 ANO7Q6IWH7 933 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 HS2ST1Q7LGA3 356 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 FILIP1Q7Z7B0 1213 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 KIAA1958Q8N8K9 716 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 OR6B3Q8NGW1 331 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 DHX58Q96C10 678 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 INTS4Q96HW7 963 aaKnown RBP15.43■□□□□ 0.06
TUBB3-215ENST00000625617 C8orf48Q96LL4 319 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 SLITRK1Q96PX8 696 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 TPSD1Q9BZJ3 242 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 ELOVL4Q9GZR5 314 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 KBTBD4Q9NVX7 518 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 SMPD4Q9NXE4 827 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 CPQQ9Y646 472 aa15.43■□□□□ 0.06
TUBB3-215ENST00000625617 BCLAF3A2AJT9 711 aaKnown RBP15.42■□□□□ 0.06
TUBB3-215ENST00000625617 SPTLC2O15270 562 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 STX6O43752 255 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 OLFM2O95897 454 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 ABL1P00519 1130 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 OAS1P00973 400 aaKnown RBP15.42■□□□□ 0.06
TUBB3-215ENST00000625617 GNL1P36915 607 aaPredicted RBP15.42■□□□□ 0.06
TUBB3-215ENST00000625617 CYP24A1Q07973 514 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 PSMD6Q15008 389 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 GAB4Q2WGN9 574 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 TDRD10Q5VZ19 366 aaKnown RBP15.42■□□□□ 0.06
TUBB3-215ENST00000625617 PMS2CLQ68D20 193 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 EPM2AIP1Q7L775 607 aaPredicted RBP15.42■□□□□ 0.06
TUBB3-215ENST00000625617 DDX42Q86XP3 938 aaKnown RBP eCLIP15.42■□□□□ 0.06
TUBB3-215ENST00000625617 RDH13Q8NBN7 331 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 LINC00301Q8NCQ3 95 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 CCDC127Q96BQ5 260 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 CNOT6LQ96LI5 555 aaKnown RBP15.42■□□□□ 0.06
TUBB3-215ENST00000625617 LSM14BQ9BX40 385 aaKnown RBP15.42■□□□□ 0.06
TUBB3-215ENST00000625617 ZNF518BQ9C0D4 1074 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 MMP17Q9ULZ9 603 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 INVSQ9Y283 1065 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 NME7Q9Y5B8 376 aa15.42■□□□□ 0.06
TUBB3-215ENST00000625617 GREB1Q4ZG55 1949 aa15.41■□□□□ 0.06
TUBB3-215ENST00000625617 DENND4CQ5VZ89 1909 aa15.41■□□□□ 0.06
TUBB3-215ENST00000625617 K7EQS6 105 aa15.41■□□□□ 0.06
TUBB3-215ENST00000625617 SCAMP3O14828 347 aaKnown RBP15.41■□□□□ 0.06
TUBB3-215ENST00000625617 TGFB1I1O43294 461 aa15.41■□□□□ 0.06
TUBB3-215ENST00000625617 CLSTN1O94985 981 aa15.41■□□□□ 0.06
TUBB3-215ENST00000625617 ADH1CP00326 375 aa15.41■□□□□ 0.06
TUBB3-215ENST00000625617 SHC2P98077 582 aa15.41■□□□□ 0.06
TUBB3-215ENST00000625617 IFRD2Q12894 506 aaPredicted RBP15.41■□□□□ 0.06
TUBB3-215ENST00000625617 TAF10Q12962 218 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms