RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 PCED1BQ96HM7 432 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 OSBPL9Q96SU4 736 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 B3GNT5Q9BYG0 378 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 CARD9Q9H257 536 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 PRDM5Q9NQX1 630 aaPredicted RBP12.4□□□□□ -0.42
LINC00963-220ENST00000625171 CHST7Q9NS84 486 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 FAM49BQ9NUQ9 324 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 HSFX1Q9UBD0 423 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 ANAPC7Q9UJX3 599 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 PCDHA3Q9Y5H8 950 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 BACE2Q9Y5Z0 518 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 COL4A6Q14031 1691 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 ENC1O14682 589 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 DDX3YO15523 660 aaKnown RBP12.39□□□□□ -0.43
LINC00963-220ENST00000625171 SART1O43290 800 aaKnown RBP12.39□□□□□ -0.43
LINC00963-220ENST00000625171 CTIFO43310 598 aaKnown RBP12.39□□□□□ -0.43
LINC00963-220ENST00000625171 HCRTO43612 131 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 ATP2C2O75185 946 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 GABBR2O75899 941 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 FBXO21O94952 628 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 GJB5O95377 273 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 ERBB2P04626 1255 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 FAM200BP0CF97 657 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 LAG3P18627 525 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 CTNNA1P35221 906 aaKnown RBP12.39□□□□□ -0.43
LINC00963-220ENST00000625171 GATMP50440 423 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 PSMC1P62191 440 aaKnown RBP12.39□□□□□ -0.43
LINC00963-220ENST00000625171 SLC6A3Q01959 620 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 TMEM240Q5SV17 173 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 RASIP1Q5U651 963 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 DNAJC24Q6P3W2 148 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 OLFML1Q6UWY5 402 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 VSTM1Q6UX27 236 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 CLEC20AQ6ZU45 233 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 BEND5Q7L4P6 421 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 SLC26A9Q7LBE3 791 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 FAM35AQ86V20 835 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 CREG2Q8IUH2 290 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 RASGEF1CQ8N431 466 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 MYRIPQ8NFW9 859 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.39□□□□□ -0.43
LINC00963-220ENST00000625171 ACTRT1Q8TDG2 376 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 RABGGTAQ92696 567 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.432e-13■■■■■ 28.4
LINC00963-220ENST00000625171 SMARCD1Q96GM5 515 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 IGSF21Q96ID5 467 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 GPR62Q9BZJ7 368 aa12.39□□□□□ -0.43
LINC00963-220ENST00000625171 TIMM13Q9Y5L4 95 aaPredicted RBP12.39□□□□□ -0.43
LINC00963-220ENST00000625171 HHLA1C9JL84 531 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 DPYSL4O14531 572 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 RIOK3O14730 519 aaKnown RBP12.38□□□□□ -0.43
LINC00963-220ENST00000625171 PAPSS1O43252 624 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-220ENST00000625171 SLU7O95391 586 aaKnown RBP12.38□□□□□ -0.43
LINC00963-220ENST00000625171 CCDC130P13994 396 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 COMTP21964 271 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 ACAT1P24752 427 aaKnown RBP12.38□□□□□ -0.43
LINC00963-220ENST00000625171 TKTP29401 623 aaKnown RBP12.38□□□□□ -0.43
LINC00963-220ENST00000625171 RFC1P35251 1148 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-220ENST00000625171 PPM1AP35813 382 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 MAGEA11P43364 429 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 DEFB103AP81534 67 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 GPR17Q13304 367 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 USP41Q3LFD5 358 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 MDH1BQ5I0G3 518 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 EFHC1Q5JVL4 640 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 VARS2Q5ST30 1063 aaKnown RBP12.38□□□□□ -0.43
LINC00963-220ENST00000625171 PM20D1Q6GTS8 502 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 SLC8B1Q6J4K2 584 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 ZNF280DQ6N043 979 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 KCNT2Q6UVM3 1135 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 ZNF365Q70YC5 407 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 PIGZQ86VD9 579 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 LRRTM3Q86VH5 581 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 SLC39A11Q8N1S5 342 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 UBL4BQ8N7F7 174 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 MNS1Q8NEH6 495 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 OR10T2Q8NGX3 314 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-220ENST00000625171 PIK3R5Q8WYR1 880 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 CLP1Q92989 425 aaKnown RBP12.38□□□□□ -0.43
LINC00963-220ENST00000625171 ZNF558Q96NG5 402 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 SLC9A7Q96T83 725 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 SMOQ99835 787 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 TTPALQ9BTX7 342 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 SELENOOQ9BVL4 669 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 SYNCQ9H7C4 482 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 CNGB3Q9NQW8 809 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 COMMD8Q9NX08 183 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 MAFFQ9ULX9 164 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 PRG3Q9Y2Y8 225 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-220ENST00000625171 INSL6Q9Y581 213 aa12.38□□□□□ -0.43
LINC00963-220ENST00000625171 C2CD4BA6NLJ0 364 aa12.37□□□□□ -0.43
LINC00963-220ENST00000625171 E5RJQ4 531 aa12.37□□□□□ -0.43
LINC00963-220ENST00000625171 F8W810 466 aa12.37□□□□□ -0.43
LINC00963-220ENST00000625171 I3L4J1 428 aa12.37□□□□□ -0.43
LINC00963-220ENST00000625171 TNFRSF10AO00220 468 aa12.37□□□□□ -0.43
LINC00963-220ENST00000625171 ATMINO43313 823 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-220ENST00000625171 PSTPIP1O43586 416 aa12.37□□□□□ -0.43
LINC00963-220ENST00000625171 FTCDO95954 541 aa12.37□□□□□ -0.43
LINC00963-220ENST00000625171 SOD2P04179 222 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms