RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ZIM3Q96PE6 472 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 GOLGA6AQ9NYA3 693 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 ASIC3Q9UHC3 531 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 ADAM21Q9UKJ8 722 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 PADI3Q9ULW8 664 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 SNX24Q9Y343 169 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 THSD7BQ9C0I4 1608 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 TCRBV7S2A1N4TA0A589 114 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 PPEF2O14830 753 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 PRPSAP2O60256 369 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 RARGP13631 454 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 GJC1P36383 396 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 HSD17B3P37058 310 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 PTPN9P43378 593 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 PLTPP55058 493 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 GRIK3Q13003 919 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 BYSLQ13895 437 aaKnown RBP17.16■□□□□ 0.34
LDB3-208ENST00000623007 OLFML1Q6UWY5 402 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 MFSD7Q6UXD7 560 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 FAM183BPQ6ZVS7 135 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 BBS12Q6ZW61 710 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 TRMT10CQ7L0Y3 403 aaKnown RBP17.16■□□□□ 0.34
LDB3-208ENST00000623007 HOOK3Q86VS8 718 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 TTC30AQ86WT1 665 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 DDX42Q86XP3 938 aaKnown RBP eCLIP17.16■□□□□ 0.34
LDB3-208ENST00000623007 C12orf29Q8N999 325 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 JOSD2Q8TAC2 188 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 TRIM31Q9BZY9 425 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 PABPC3Q9H361 631 aaKnown RBP17.16■□□□□ 0.34
LDB3-208ENST00000623007 GRHL1Q9NZI5 618 aa17.16■□□□□ 0.34
LDB3-208ENST00000623007 INPPL1O15357 1258 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 LIASO43766 372 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 ZNF189O75820 626 aaPredicted RBP17.15■□□□□ 0.34
LDB3-208ENST00000623007 GJB6O95452 261 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 TRUB2O95900 331 aaKnown RBP17.15■□□□□ 0.34
LDB3-208ENST00000623007 CTSHP09668 335 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 NUDT17P0C025 328 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 MYZAPP0CAP1 466 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 KDELR1P24390 212 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 PCSK1P29120 753 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 RPL21P46778 160 aaKnown RBP17.15■□□□□ 0.34
LDB3-208ENST00000623007 PLCB3Q01970 1234 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 SOX4Q06945 474 aaPredicted RBP17.15■□□□□ 0.34
LDB3-208ENST00000623007 PDE4CQ08493 712 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 DSC3Q14574 896 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 PCGF5Q86SE9 256 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 ARFGAP2Q8N6H7 521 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 KCTD6Q8NC69 237 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 UBLCP1Q8WVY7 318 aaPredicted RBP17.15■□□□□ 0.34
LDB3-208ENST00000623007 RXFP2Q8WXD0 754 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 KCTD13Q8WZ19 329 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 MAK16Q9BXY0 300 aaKnown RBP17.15■□□□□ 0.34
LDB3-208ENST00000623007 TXLNGYQ9BZA5 131 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 PLEKHA4Q9H4M7 779 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 HMX1Q9NP08 348 aaPredicted RBP17.15■□□□□ 0.34
LDB3-208ENST00000623007 CHST7Q9NS84 486 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 TMEM51Q9NW97 253 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 PLAAQ9Y263 795 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 FAN1Q9Y2M0 1017 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 PTPN22Q9Y2R2 807 aa17.15■□□□□ 0.34
LDB3-208ENST00000623007 ARL5CA6NH57 179 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 MDM4O15151 490 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 AOC2O75106 756 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 FBXO21O94952 628 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 EOMESO95936 686 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 ODC1P11926 461 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 ELNP15502 786 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 MIPP30301 263 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 MLH1P40692 756 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 APLP1P51693 650 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 PMS2P54278 862 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 PMF1Q6P1K2 205 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 GSTA5Q7RTV2 222 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 METTL23Q86XA0 190 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 PSTKQ8IV42 348 aaKnown RBP17.14■□□□□ 0.33
LDB3-208ENST00000623007 FBXO25Q8TCJ0 367 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 PPP1R13LQ8WUF5 828 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 RSPH1Q8WYR4 309 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 HEMGNQ9BXL5 484 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 FTHL17Q9BXU8 183 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 DUSP16Q9BY84 665 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 STMN4Q9H169 189 aaPredicted RBP17.14■□□□□ 0.33
LDB3-208ENST00000623007 FAM49BQ9NUQ9 324 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 SAGE1Q9NXZ1 904 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 CDH9Q9ULB4 789 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 PTCH2Q9Y6C5 1203 aa17.14■□□□□ 0.33
LDB3-208ENST00000623007 SPTLC1O15269 473 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 COL6A1P12109 1028 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 ADCY8P40145 1251 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 VCPP55072 806 aaKnown RBP17.13■□□□□ 0.33
LDB3-208ENST00000623007 TRIM32Q13049 653 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 TRADDQ15628 312 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 MAPRE1Q15691 268 aaKnown RBP17.13■□□□□ 0.33
LDB3-208ENST00000623007 DENND2CQ68D51 928 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 ZDHHC24Q6UX98 284 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 SENP8Q96LD8 212 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 GAD1Q99259 594 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 TRIM62Q9BVG3 475 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 FAM204AQ9H8W3 233 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 ZNF148Q9UQR1 794 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms