RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SCAF8Q9UPN6 1271 aaKnown RBP5.75□□□□□ -1.49
CPNE3-213ENST00000622183 LZTS1Q9Y250 596 aa5.75□□□□□ -1.49
CPNE3-213ENST00000622183 A0A0B4J269 797 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 OR2W5A6NFC9 320 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 RNASET2O00584 256 aaKnown RBP5.74□□□□□ -1.49
CPNE3-213ENST00000622183 PCDH17O14917 1159 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 IRAK2O43187 625 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 TRIAP1O43715 76 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 CSF1RP07333 972 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 ARP10275 920 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 ACRV1P26436 265 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 FPGSQ05932 587 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 TUBB3Q13509 450 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 E2F2Q14209 437 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 RALBP1Q15311 655 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 CYP2A13Q16696 494 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 GEN1Q17RS7 908 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 CD300EQ496F6 205 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-213ENST00000622183 ARHGAP40Q5TG30 622 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 SP5Q6BEB4 398 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-213ENST00000622183 RGS7BPQ6MZT1 257 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-213ENST00000622183 CCDC70Q6NSX1 233 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 ARMC6Q6NXE6 501 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 CYP26C1Q6V0L0 522 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 SLC15A3Q8IY34 581 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 OTUD7AQ8TE49 926 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-213ENST00000622183 TMEM125Q96AQ2 219 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 GBA2Q9HCG7 927 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-213ENST00000622183 HELLSQ9NRZ9 838 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 TMEM74BQ9NUR3 256 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 C9orf78Q9NZ63 289 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-213ENST00000622183 VPS51Q9UID3 782 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 HERC5Q9UII4 1024 aaKnown RBP5.74□□□□□ -1.49
CPNE3-213ENST00000622183 ANAPC4Q9UJX5 808 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 SSX2IPQ9Y2D8 614 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 LRRFIP2Q9Y608 721 aaKnown RBP5.74□□□□□ -1.49
CPNE3-213ENST00000622183 HS3ST4Q9Y661 456 aa5.74□□□□□ -1.49
CPNE3-213ENST00000622183 F5H697 171 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 CCNT2O60583 730 aaKnown RBP5.73□□□□□ -1.49
CPNE3-213ENST00000622183 WDHD1O75717 1129 aaPredicted RBP5.73□□□□□ -1.49
CPNE3-213ENST00000622183 NTSR2O95665 410 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 MAPK9P45984 424 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 SELENOPP49908 381 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 BCAT1P54687 386 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 FAM189BP81408 668 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 GPS1Q13098 491 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 ATP1A4Q13733 1029 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 CCNIQ14094 377 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 SPDYE7PQ495Y7 208 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 VPS53Q5VIR6 699 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 ICE2Q659A1 982 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 ABLIM2Q6H8Q1 611 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 SULT6B1Q6IMI4 303 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 TMPRSS6Q8IU80 811 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 SUGP1Q8IWZ8 645 aaKnown RBP5.73□□□□□ -1.49
CPNE3-213ENST00000622183 PAF1Q8N7H5 531 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 NACC2Q96BF6 587 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 TBATAQ96M53 351 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 FAM167BQ9BTA0 163 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 ZCWPW1Q9H0M4 648 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 TP63Q9H3D4 680 aaPredicted RBP5.73□□□□□ -1.49
CPNE3-213ENST00000622183 GALNT9Q9HCQ5 603 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 AKIP1Q9NQ31 210 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 INTS13Q9NVM9 706 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 ZNF69Q9UC07 566 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 TCAF1Q9Y4C2 921 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 NOX1Q9Y5S8 564 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 ADAMTS20P59510 1910 aa5.73□□□□□ -1.49
CPNE3-213ENST00000622183 NCR1O76036 304 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 VIPP01282 170 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 CD53P19397 219 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 PRKAR1BP31321 381 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 PDE6CP51160 858 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 PGDP52209 483 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 VAV2P52735 878 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 PNLIPRP1P54315 467 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 JAG1P78504 1218 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 TIAL1Q01085 375 aaKnown RBP eCLIP5.72□□□□□ -1.49
CPNE3-213ENST00000622183 TAF5Q15542 800 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 BEAN1Q3B7T3 259 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 LVRNQ6Q4G3 990 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 KLHL17Q6TDP4 642 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 MMS22LQ6ZRQ5 1243 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 RASGRP3Q8IV61 690 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 COLGALT2Q8IYK4 626 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 OR1N1Q8NGS0 311 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 MBD3L2Q8NHZ7 208 aaPredicted RBP5.72□□□□□ -1.49
CPNE3-213ENST00000622183 RSC1A1Q92681 617 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 FUBP1Q96AE4 644 aaKnown RBP5.72□□□□□ -1.49
CPNE3-213ENST00000622183 RNF31Q96EP0 1072 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 UBXN10Q96LJ8 280 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 ZSCAN31Q96LW9 406 aaPredicted RBP5.72□□□□□ -1.49
CPNE3-213ENST00000622183 ALOXE3Q9BYJ1 711 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 DEF6Q9H4E7 631 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 ZNF768Q9H5H4 540 aaKnown RBP5.72□□□□□ -1.49
CPNE3-213ENST00000622183 SAYSD1Q9NPB0 183 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 RRN3Q9NYV6 651 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 SERTAD3Q9UJW9 196 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 GJD2Q9UKL4 321 aa5.72□□□□□ -1.49
CPNE3-213ENST00000622183 FCHO1O14526 889 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms