RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 FAM200BP0CF97 657 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 HADHBP55084 474 aaKnown RBP16.76■□□□□ 0.27
CBWD3-216ENST00000621396 ADIGQ0VDE8 80 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 IFRD2Q12894 506 aaPredicted RBP16.76■□□□□ 0.27
CBWD3-216ENST00000621396 DCAF12L1Q5VU92 463 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 SDHAF4Q5VUM1 108 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 FAM171BQ6P995 826 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 KCNT2Q6UVM3 1135 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 CREG2Q8IUH2 290 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 TTC9BQ8N6N2 239 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 IPO4Q8TEX9 1081 aaKnown RBP16.76■□□□□ 0.27
CBWD3-216ENST00000621396 HES6Q96HZ4 224 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 SLC4A5Q9BY07 1137 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 RC3H2Q9HBD1 1191 aaKnown RBP16.76■□□□□ 0.27
CBWD3-216ENST00000621396 ABI2Q9NYB9 513 aaPredicted RBP16.76■□□□□ 0.27
CBWD3-216ENST00000621396 SCINQ9Y6U3 715 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 VWA8A3KMH1 1905 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 SF3B1O75533 1304 aaKnown RBP eCLIP16.76■□□□□ 0.27
CBWD3-216ENST00000621396 SOAT2O75908 522 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 FLT3P36888 993 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 GABRB2P47870 512 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 CTXN3Q4LDR2 81 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 TMEM240Q5SV17 173 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 TMEM110Q86TL2 294 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 ACSF2Q96CM8 615 aaPredicted RBP16.76■□□□□ 0.27
CBWD3-216ENST00000621396 PKMYT1Q99640 499 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 STRIP2Q9ULQ0 834 aa16.76■□□□□ 0.27
CBWD3-216ENST00000621396 TSC2P49815 1807 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 OAZ2O95190 189 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 TYMPP19971 482 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 PLCB3Q01970 1234 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 TCEAL1Q15170 157 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 CDO1Q16878 200 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 ATP13A4Q4VNC1 1196 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 ADAT2Q7Z6V5 191 aaKnown RBP16.75■□□□□ 0.27
CBWD3-216ENST00000621396 ATAD1Q8NBU5 361 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 GPR152Q8TDT2 470 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 ZBED2Q9BTP6 218 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 EPC1Q9H2F5 836 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 KLHL11Q9NVR0 708 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 DDX3YO15523 660 aaKnown RBP16.75■□□□□ 0.27
CBWD3-216ENST00000621396 TAS2R40P59535 323 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 TSPY1Q01534 308 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 C15orf59Q2T9L4 293 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-216ENST00000621396 TXNRD3NBQ6F5E7 133 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 C11orf63Q6NUN7 778 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 OLFML1Q6UWY5 402 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 SPRED2Q7Z698 418 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 AUTS2Q8WXX7 1259 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 KHSRPQ92945 711 aaKnown RBP eCLIP16.75■□□□□ 0.27
CBWD3-216ENST00000621396 MCRS1Q96EZ8 462 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 IGSF21Q96ID5 467 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 CFAP57Q96MR6 1250 aa16.75■□□□□ 0.27
CBWD3-216ENST00000621396 LCHNA4D1U4 455 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 CCDC85CA6NKD9 419 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 SIGLEC16A6NMB1 481 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 ADAM12O43184 909 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 FAM163BP0C2L3 166 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 TFE3P19532 575 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-216ENST00000621396 DNAJB2P25686 324 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 PLA2G4AP47712 749 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 GPR15P49685 360 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 MRPS25P82663 173 aaKnown RBP16.74■□□□□ 0.27
CBWD3-216ENST00000621396 PPIGQ13427 754 aaKnown RBP eCLIP16.74■□□□□ 0.27
CBWD3-216ENST00000621396 ZNF268Q14587 947 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-216ENST00000621396 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-216ENST00000621396 SLC27A5Q9Y2P5 690 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 XPO1O14980 1071 aaKnown RBP16.74■□□□□ 0.27
CBWD3-216ENST00000621396 PROSCO94903 275 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 GJB5O95377 273 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 SLU7O95391 586 aaKnown RBP16.74■□□□□ 0.27
CBWD3-216ENST00000621396 TKTL1P51854 596 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 SLC8A3P57103 927 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 ATP11AP98196 1134 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 MSANTD4Q8NCY6 345 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 SCAMP5Q8TAC9 235 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 TMEM175Q9BSA9 504 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 LTBP2Q14767 1821 aa16.74■□□□□ 0.27
CBWD3-216ENST00000621396 CEP104O60308 925 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 SETSIPP0DME0 302 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 FGFR3P22607 806 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 PSMA2P25787 234 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 DDR2Q16832 855 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 SPATA2LQ8IUW3 424 aaPredicted RBP16.73■□□□□ 0.27
CBWD3-216ENST00000621396 SCN4BQ8IWT1 228 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 ARFGAP1Q8N6T3 406 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 MNS1Q8NEH6 495 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 RIN2Q8WYP3 895 aaPredicted RBP16.73■□□□□ 0.27
CBWD3-216ENST00000621396 CD101Q93033 1021 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 FAM149B1Q96BN6 582 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 SMARCD1Q96GM5 515 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 HINFPQ9BQA5 517 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 TTPALQ9BTX7 342 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 CDY1Q9Y6F8 540 aa16.73■□□□□ 0.27
CBWD3-216ENST00000621396 UQCRHLA0A096LP55 91 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 SYN3O14994 580 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 BAIAP3O94812 1187 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 UQCRHP07919 91 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 USP17L7P0C7H9 530 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 CPB1P15086 417 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms