RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TIMMDC1Q9NPL8 285 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 BTN3A3O00478 584 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 CDC40O60508 579 aaKnown RBP eCLIP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 HUS1O60921 280 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 HIRAP54198 1017 aaPredicted RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 SNRPFP62306 86 aaKnown RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 WDR93Q6P2C0 686 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 SAMD7Q7Z3H4 446 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 ARHGEF19Q8IW93 802 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 OTUD7AQ8TE49 926 aaPredicted RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 USP13Q92995 863 aaPredicted RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 CAMKK2Q96RR4 588 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 ANTXR1Q9H6X2 564 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 GBA2Q9HCG7 927 aaPredicted RBP7.43□□□□□ -1.22
COLCA1-205ENST00000620864 GSTK1Q9Y2Q3 226 aa7.43□□□□□ -1.22
COLCA1-205ENST00000620864 A0A0D9SFI3 127 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 A0A1W2PQJ5 194 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 CHP2O43745 196 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 PEX1O43933 1283 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 ZNF23P17027 643 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 POLR2EP19388 210 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 ARHGDIBP52566 201 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 SPP2Q13103 211 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 HIST2H2ACQ16777 129 aaPredicted RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 KCNT1Q5JUK3 1230 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 EFHC1Q5JVL4 640 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 HIST2H2AA3Q6FI13 130 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 USP17L2Q6R6M4 530 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 TCAIMQ8N3R3 496 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 GRPEL2Q8TAA5 225 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 TBCKQ8TEA7 893 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 ANKRD49Q8WVL7 239 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 SYN2Q92777 582 aaPredicted RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 KANSL2Q9H9L4 492 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 NEU2Q9Y3R4 380 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 EFCAB10A6NFE3 127 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 EXTL3O43909 919 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 GLRA3O75311 464 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 SKAP2O75563 359 aaPredicted RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 NPM3O75607 178 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 CCDC166P0CW27 439 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 FASP25445 335 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 YWHABP31946 246 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 EIF3EP60228 445 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 RBM20Q5T481 1227 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 NEK5Q6P3R8 708 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 PTPRN2Q92932 1015 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 MLXIPLQ9NP71 852 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 RPL26L1Q9UNX3 145 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 IFNGR2P38484 337 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 ACLYP53396 1101 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 SLC34A1Q06495 639 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 AMER2Q8N7J2 671 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 PSMA8Q8TAA3 256 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 PAIP1Q9H074 479 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 ADARB2Q9NS39 739 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 HOXC10Q9NYD6 342 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 ATP7BP35670 1465 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 ARHGEF5Q12774 1597 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 C15orf38-AP3S2A0A0A6YYH1 394 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 SRRM3A6NNA2 597 aaPredicted RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 RAD51BO15315 384 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 FCER1AP12319 257 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 GNA15P30679 374 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 ARPC4P59998 168 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 SPIRE1Q08AE8 756 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 LRRC74AQ0VAA2 488 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 KCNH2Q12809 1159 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 STX4Q12846 297 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 GSTA3Q16772 222 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 NECAB2Q7Z6G3 386 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 ARPINQ7Z6K5 226 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 GPKOWQ92917 476 aaPredicted RBP eCLIP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 BSDC1Q9NW68 430 aaPredicted RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 MAPRE3Q9UPY8 281 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 SH3GLB1Q9Y371 365 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 PHF20L1A8MW92 1017 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 SRGAP2O75044 1071 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 TUBA1BP68363 451 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 BTKQ06187 659 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 GFPT1Q06210 699 aaPredicted RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 XRCC4Q13426 336 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 ZNF235Q14590 738 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 VEPH1Q14D04 833 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 SLC18A3Q16572 532 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 FAM180AQ6UWF9 173 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 RFX8Q6ZV50 586 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 TUBA1AQ71U36 451 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 FAM20AQ96MK3 541 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 TASP1Q9H6P5 420 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 NOL6Q9H6R4 1146 aaKnown RBP7.42□□□□□ -1.22
COLCA1-205ENST00000620864 AASDHPPTQ9NRN7 309 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 PFDN2Q9UHV9 154 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 CLASP1Q7Z460 1538 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 FAM220BPB1ANY3 271 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 AXIN1O15169 862 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 CLIC2O15247 247 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 KRT34O76011 436 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 PRIM2P49643 509 aa7.42□□□□□ -1.22
COLCA1-205ENST00000620864 NUDT2P50583 147 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms