RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 DTNAQ9Y4J8 743 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 MYO1GB0I1T2 1018 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 SPTLC1O15269 473 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 SOAT2O75908 522 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 ERVK-10P10266 1014 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 BEX3Q00994 111 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 MTM1Q13496 603 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 CAMK2GQ13555 558 aaPredicted RBP11.81□□□□□ -0.52
CLIP1-219ENST00000620786 VGLL4Q14135 290 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 C3orf62Q6ZUJ4 267 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 RFX8Q6ZV50 586 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 STX19Q8N4C7 294 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 FAM162AQ96A26 154 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 TMA16Q96EY4 203 aaKnown RBP11.81□□□□□ -0.52
CLIP1-219ENST00000620786 CBWD1Q9BRT8 395 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 PJA2O43164 708 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 SPAG6O75602 509 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 ENO1P06733 434 aaKnown RBP11.81□□□□□ -0.52
CLIP1-219ENST00000620786 TGFB3P10600 412 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 FGFR2P21802 821 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 PEX19P40855 299 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 ADCYAP1R1P41586 468 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 TKTL1P51854 596 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 OAZ1P54368 228 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 BTKQ06187 659 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 GIT2Q14161 759 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 E4F1Q66K89 784 aaPredicted RBP11.81□□□□□ -0.52
CLIP1-219ENST00000620786 REPS2Q8NFH8 660 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 TMEM176AQ96HP8 235 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 RIC8BQ9NVN3 520 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 TRIM10Q9UDY6 481 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 TAF6LQ9Y6J9 622 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 SALL1Q9NSC2 1324 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 NFE2Q16621 373 aaPredicted RBP11.81□□□□□ -0.52
CLIP1-219ENST00000620786 UNC45BQ8IWX7 931 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 C4orf33Q8N1A6 199 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 OSGEPL1Q9H4B0 414 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 GPATCH2LQ9NWQ4 482 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 ALG6Q9Y672 507 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 PSTPIP1O43586 416 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 ADCY3O60266 1144 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 TSPAN3O60637 253 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 PTPN7P35236 360 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 ITGA8P53708 1063 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 CYP24A1Q07973 514 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 BST2Q10589 180 aaKnown RBP11.81□□□□□ -0.52
CLIP1-219ENST00000620786 PPIL2Q13356 520 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 CNPY4Q8N129 248 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 SYT15Q9BQS2 421 aa11.81□□□□□ -0.52
CLIP1-219ENST00000620786 SMAPO00193 183 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 FKBP9O95302 570 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 VIL1P09327 827 aaKnown RBP11.8□□□□□ -0.52
CLIP1-219ENST00000620786 ATXN3P54252 364 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-219ENST00000620786 IKBKEQ14164 716 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 PTPAQ15257 358 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 CLEC16AQ2KHT3 1053 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 MRNIPQ6NTE8 343 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 FKBP9P1Q75LS8 142 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 NLRP14Q86W24 1093 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 STAMBPL1Q96FJ0 436 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 KCNQ5Q9NR82 932 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 RNF112Q9ULX5 631 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 MAPK9P45984 424 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 GRIN1Q05586 938 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 DMC1Q14565 340 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 DEFB115Q30KQ5 88 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 ANKS6Q68DC2 871 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 RUBCNQ92622 972 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 GRAMD1AQ96CP6 724 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 PGLYRP2Q96PD5 576 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 XPO6Q96QU8 1125 aaKnown RBP11.8□□□□□ -0.52
CLIP1-219ENST00000620786 PNKPQ96T60 521 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 PRPF18Q99633 342 aaKnown RBP11.8□□□□□ -0.52
CLIP1-219ENST00000620786 THAP2Q9H0W7 228 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 FER1L4A9Z1Z3 1794 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 PON1P27169 355 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 MAGEA4P43358 317 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 FXR1P51114 621 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLIP1-219ENST00000620786 MYL6P60660 151 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 PREPLQ4J6C6 727 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-219ENST00000620786 FAXCQ5TGI0 409 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 TAF2Q6P1X5 1199 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 MRPL1Q9BYD6 325 aaKnown RBP11.8□□□□□ -0.52
CLIP1-219ENST00000620786 TGM2P21980 687 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 JAMLQ86YT9 394 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 ZNF556Q9HAH1 456 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 PDGFCQ9NRA1 345 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 CACNA2D2Q9NY47 1150 aa11.8□□□□□ -0.52
CLIP1-219ENST00000620786 MARCOQ9UEW3 520 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-219ENST00000620786 PPP1R3GB7ZBB8 358 aa11.79□□□□□ -0.52
CLIP1-219ENST00000620786 AGTP01019 485 aa11.79□□□□□ -0.52
CLIP1-219ENST00000620786 SNRPAP09012 282 aaKnown RBP11.79□□□□□ -0.52
CLIP1-219ENST00000620786 KDSRQ06136 332 aa11.79□□□□□ -0.52
CLIP1-219ENST00000620786 PDK2Q15119 407 aa11.79□□□□□ -0.52
CLIP1-219ENST00000620786 SLC27A1Q6PCB7 646 aa11.79□□□□□ -0.52
CLIP1-219ENST00000620786 NCF1BA6NI72 391 aaPredicted RBP11.79□□□□□ -0.52
CLIP1-219ENST00000620786 LRRIQ3A6PVS8 624 aaPredicted RBP11.79□□□□□ -0.52
CLIP1-219ENST00000620786 NCF1CA8MVU1 366 aaPredicted RBP11.79□□□□□ -0.52
CLIP1-219ENST00000620786 TCP11X1B4DZS4 312 aa11.79□□□□□ -0.52
CLIP1-219ENST00000620786 KRT16P08779 473 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms