RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 DUOXA2Q1HG44 320 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 CCDC40Q4G0X9 1142 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 ARHGAP29Q52LW3 1261 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 INTS6LQ5JSJ4 861 aaKnown RBP17.18■□□□□ 0.34
CD40-207ENST00000620709 CCDC186Q7Z3E2 898 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 SPATA2LQ8IUW3 424 aaPredicted RBP17.18■□□□□ 0.34
CD40-207ENST00000620709 SCN4BQ8IWT1 228 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 DCLK2Q8N568 766 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 BPIFB1Q8TDL5 484 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 HPDLQ96IR7 371 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 ACBD6Q9BR61 282 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 SLC46A2Q9BY10 475 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 VPS16Q9H269 839 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 C8orf33Q9H7E9 229 aaPredicted RBP17.18■□□□□ 0.34
CD40-207ENST00000620709 THG1LQ9NWX6 298 aaKnown RBP17.18■□□□□ 0.34
CD40-207ENST00000620709 ZNF292O60281 2723 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 NUP210Q8TEM1 1887 aaPredicted RBP17.18■□□□□ 0.34
CD40-207ENST00000620709 FANCMQ8IYD8 2048 aa17.18■□□□□ 0.34
CD40-207ENST00000620709 ARNTLO00327 626 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 TGFB1I1O43294 461 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 CLSTN1O94985 981 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 NR3C1P04150 777 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 AVPR1AP37288 418 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 CCDC142Q17RM4 750 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 TOP6BLQ8N6T0 577 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 MRPS31Q92665 395 aaKnown RBP17.17■□□□□ 0.34
CD40-207ENST00000620709 MMS19Q96T76 1030 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 CHRDQ9H2X0 955 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 TRPC7Q9HCX4 862 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 RBM12Q9NTZ6 932 aaKnown RBP17.17■□□□□ 0.34
CD40-207ENST00000620709 ZSCAN32Q9NX65 697 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 GDAP2Q9NXN4 497 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 CGNQ9P2M7 1197 aaKnown RBP17.17■□□□□ 0.34
CD40-207ENST00000620709 NCDNQ9UBB6 729 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 PCDHGA2Q9Y5H1 932 aa17.17■□□□□ 0.34
CD40-207ENST00000620709 ZNF638Q14966 1978 aaKnown RBP17.17■□□□□ 0.34
CD40-207ENST00000620709 SPECC1L-ADORA2AF8WAN1 911 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 TEX33O43247 280 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 CSH1P0DML2 217 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 CSH2P0DML3 217 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 TNNI1P19237 187 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 PCSK1P29120 753 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 LHX1P48742 406 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 MARSP56192 900 aaKnown RBP17.16■□□□□ 0.34
CD40-207ENST00000620709 PSMC1P62191 440 aaKnown RBP17.16■□□□□ 0.34
CD40-207ENST00000620709 SNRPFP62306 86 aaKnown RBP17.16■□□□□ 0.34
CD40-207ENST00000620709 RPL10AP62906 217 aaKnown RBP17.16■□□□□ 0.34
CD40-207ENST00000620709 TNK2Q07912 1038 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 PPP2R5DQ14738 602 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 MAN2A1Q16706 1144 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 SPECC1LQ69YQ0 1117 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 TXNDC8Q6A555 127 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 CMTM8Q8IZV2 173 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 ZNF687Q8N1G0 1237 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 CELF5Q8N6W0 485 aaKnown RBP17.16■□□□□ 0.34
CD40-207ENST00000620709 CXorf38Q8TB03 319 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 RUBCNQ92622 972 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 CCDC127Q96BQ5 260 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 FNBP1Q96RU3 617 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 KIAA1586Q9HCI6 787 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 AGPAT3Q9NRZ7 376 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 PES1O00541 588 aaKnown RBP17.16■□□□□ 0.34
CD40-207ENST00000620709 SLC16A3O15427 465 aaKnown RBP17.16■□□□□ 0.34
CD40-207ENST00000620709 ATP2C2O75185 946 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 PDGFRBP09619 1106 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 CHRNB1P11230 501 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 HMGA1P17096 107 aaKnown RBP17.16■□□□□ 0.34
CD40-207ENST00000620709 PBX1P40424 430 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 ID4P47928 161 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 UBXN1Q04323 297 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 LRRC32Q14392 662 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 PON2Q15165 354 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 SNRNP35Q16560 246 aaKnown RBP17.16■□□□□ 0.34
CD40-207ENST00000620709 SOWAHAQ2M3V2 549 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 MSANTD3Q96H12 275 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 PRMT8Q9NR22 394 aaPredicted RBP17.16■□□□□ 0.34
CD40-207ENST00000620709 GKN1Q9NS71 199 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 OBP2AQ9NY56 170 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 CCL26Q9Y258 94 aa17.16■□□□□ 0.34
CD40-207ENST00000620709 KIF26AQ9ULI4 1882 aaPredicted RBP17.15■□□□□ 0.34
CD40-207ENST00000620709 ITIH6Q6UXX5 1313 aa17.15■□□□□ 0.34
CD40-207ENST00000620709 MYBPHLA2RUH7 354 aa17.15■□□□□ 0.34
CD40-207ENST00000620709 F11P03951 625 aa17.15■□□□□ 0.34
CD40-207ENST00000620709 EPB41P11171 864 aaKnown RBP17.15■□□□□ 0.34
CD40-207ENST00000620709 CTHP32929 405 aa17.15■□□□□ 0.34
CD40-207ENST00000620709 CCR3P51677 355 aa17.15■□□□□ 0.34
CD40-207ENST00000620709 TXNDC11Q6PKC3 985 aa17.15■□□□□ 0.34
CD40-207ENST00000620709 TMEM150AQ86TG1 271 aa17.15■□□□□ 0.34
CD40-207ENST00000620709 WDR49Q8IV35 697 aa17.15■□□□□ 0.34
CD40-207ENST00000620709 SUMF1Q8NBK3 374 aa17.15■□□□□ 0.34
CD40-207ENST00000620709 CCDC150Q8NCX0 1101 aa17.15■□□□□ 0.34
CD40-207ENST00000620709 SYT15Q9BQS2 421 aa17.15■□□□□ 0.34
CD40-207ENST00000620709 LMO2P25791 158 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 DDX6P26196 483 aaKnown RBP eCLIP17.14■□□□□ 0.33
CD40-207ENST00000620709 CXCL12P48061 93 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 SATB1Q01826 763 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 CYP27A1Q02318 531 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 ITPRIPL2Q3MIP1 535 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 VWA3BQ502W6 1294 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 MIIPQ5JXC2 388 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms