RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 ZNF576Q9H609 170 aa11.65□□□□□ -0.54
SNORD3D-201ENST00000619178 CSNK1G1Q9HCP0 422 aa11.65□□□□□ -0.54
SNORD3D-201ENST00000619178 TMEM51Q9NW97 253 aa11.65□□□□□ -0.54
SNORD3D-201ENST00000619178 ADAM22Q9P0K1 906 aa11.65□□□□□ -0.54
SNORD3D-201ENST00000619178 C2orf16Q68DN1 1984 aa11.65□□□□□ -0.55
SNORD3D-201ENST00000619178 NUP210Q8TEM1 1887 aaPredicted RBP11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 WDR27A2RRH5 827 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 C2orf71A6NGG8 1288 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 DDX3XO00571 662 aaKnown RBP eCLIP11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 FSCN2O14926 492 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 GRM6O15303 877 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 TEX28O15482 410 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 LILRB3O75022 631 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 LRG1P02750 347 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 FTLP02792 175 aaPredicted RBP11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 CNPP09543 421 aaKnown RBP11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 TMEM253P0C7T8 217 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 HAPLN1P10915 354 aaPredicted RBP11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 SCNN1AP37088 669 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 GPD2P43304 727 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 VAV2P52735 878 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 EPHB3P54753 998 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 MAP3K7CLP57077 242 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 GPC5P78333 572 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 PDE4CQ08493 712 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 PDCLQ13371 301 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 ZNF268Q14587 947 aaPredicted RBP11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 ARHGAP29Q52LW3 1261 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 ZNF697Q5TEC3 545 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 CLEC20AQ6ZU45 233 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 SCN4BQ8IWT1 228 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 TCEAL8Q8IYN2 117 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 ARHGAP18Q8N392 663 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 UBA3Q8TBC4 463 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 SLC35F5Q8WV83 523 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 SPATA17Q96L03 361 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 KLHL5Q96PQ7 755 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 SEPT5Q99719 369 aaPredicted RBP11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 CYP4F11Q9HBI6 524 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 ACP6Q9NPH0 428 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 CNGB3Q9NQW8 809 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 SPTLC3Q9NUV7 552 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 PARVAQ9NVD7 372 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 UXTQ9UBK9 157 aaPredicted RBP11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 ASB3Q9Y575 518 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 NME7Q9Y5B8 376 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 PCDHA13Q9Y5I0 950 aa11.64□□□□□ -0.55
SNORD3D-201ENST00000619178 TMCO5BA8MYB1 307 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 HCRTO43612 131 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 NCK2O43639 380 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 FGF19O95750 216 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 OR4Q2P0C623 313 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 CSH1P0DML2 217 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 CSH2P0DML3 217 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 RPL17P18621 184 aaKnown RBP11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 MMP8P22894 467 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 GABRB2P47870 512 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 PSEN1P49768 467 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 GSCP56915 257 aaPredicted RBP11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 ERVFC1P60507 584 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 PKDCCQ504Y2 493 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 EFHC1Q5JVL4 640 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 DENND1BQ6P3S1 775 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 RAD9BQ6WBX8 426 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 RNF19BQ6ZMZ0 732 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 PIGZQ86VD9 579 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 LRRTM3Q86VH5 581 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 TTC30AQ86WT1 665 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 NUP93Q8N1F7 819 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 SCML4Q8N228 414 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 PDZD8Q8NEN9 1154 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 CPA5Q8WXQ8 436 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 IRGQQ8WZA9 623 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 ZNF653Q96CK0 615 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 PGLYRP2Q96PD5 576 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 SLITRK1Q96PX8 696 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 TMEM209Q96SK2 561 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 NCAPGQ9BPX3 1015 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 TLE6Q9H808 572 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 AVENQ9NQS1 362 aaPredicted RBP11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 UVRAGQ9P2Y5 699 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 COLQQ9Y215 455 aaPredicted RBP11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 ADGRG1Q9Y653 693 aa11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNORD3D-201ENST00000619178 A0A0A6YYK5 440 aaPredicted RBP11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 F8VP50 259 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 CLDN5O00501 218 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 XYLBO75191 536 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 GLI1P08151 1106 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 HNRNPA1P09651 372 aaKnown RBP eCLIP11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 CYP2F1P24903 491 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 HOXA9P31269 272 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 PPP3CCP48454 512 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 GALCP54803 685 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 DUSP4Q13115 394 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 PPM1LQ5SGD2 360 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 GPR153Q6NV75 609 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 ZNF662Q6ZS27 426 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 DENND5BQ6ZUT9 1274 aa11.62□□□□□ -0.55
SNORD3D-201ENST00000619178 PAQR9Q6ZVX9 377 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms