RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 SDCBP2Q9H190 292 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 C8orf33Q9H7E9 229 aaPredicted RBP23.29■■□□□ 1.32
TRAF4-217ENST00000618771 TRPC7Q9HCX4 862 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 TDP1Q9NUW8 608 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 GTSE1Q9NYZ3 720 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 MED19A0JLT2 244 aaPredicted RBP23.28■■□□□ 1.32
TRAF4-217ENST00000618771 KINO60870 393 aaKnown RBP23.28■■□□□ 1.32
TRAF4-217ENST00000618771 ASS1P00966 412 aaKnown RBP23.28■■□□□ 1.32
TRAF4-217ENST00000618771 HLA-DRAP01903 254 aa23.28■■□□□ 1.32
TRAF4-217ENST00000618771 TRIM49P0CI25 452 aa23.28■■□□□ 1.32
TRAF4-217ENST00000618771 TRIM49CP0CI26 452 aa23.28■■□□□ 1.32
TRAF4-217ENST00000618771 SOX9P48436 509 aa23.28■■□□□ 1.32
TRAF4-217ENST00000618771 SUMF1Q8NBK3 374 aa23.28■■□□□ 1.32
TRAF4-217ENST00000618771 TNIP3Q96KP6 325 aa23.28■■□□□ 1.32
TRAF4-217ENST00000618771 C8orf48Q96LL4 319 aa23.28■■□□□ 1.32
TRAF4-217ENST00000618771 B3GNT5Q9BYG0 378 aa23.28■■□□□ 1.32
TRAF4-217ENST00000618771 EHD2Q9NZN4 543 aa23.28■■□□□ 1.32
TRAF4-217ENST00000618771 TRAV19A0A0A6YYK7 116 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 SPECC1L-ADORA2AF8WAN1 911 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 SMC2O95347 1197 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 CTHP32929 405 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 GCLMP48507 274 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 USP46P62068 366 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 ENPEPQ07075 957 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 TNK2Q07912 1038 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 ZNF268Q14587 947 aaPredicted RBP23.27■■□□□ 1.32
TRAF4-217ENST00000618771 PUM1Q14671 1186 aaKnown RBP eCLIP23.27■■□□□ 1.32
TRAF4-217ENST00000618771 ZNF658Q5TYW1 1059 aaPredicted RBP23.27■■□□□ 1.32
TRAF4-217ENST00000618771 SPOPLQ6IQ16 392 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 RALGPS2Q86X27 583 aaPredicted RBP23.27■■□□□ 1.32
TRAF4-217ENST00000618771 TTC8Q8TAM2 541 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 TIGD1Q96MW7 591 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 HOOK1Q9UJC3 728 aaKnown RBP23.27■■□□□ 1.32
TRAF4-217ENST00000618771 NCOR2Q9Y618 2525 aa23.27■■□□□ 1.32
TRAF4-217ENST00000618771 CLDN5O00501 218 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 CKMP06732 381 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 USP17L7P0C7H9 530 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 PRCPP42785 496 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 CACNA2D1P54289 1103 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 NOP14P78316 857 aaKnown RBP23.26■■□□□ 1.31
TRAF4-217ENST00000618771 CSTF1Q05048 431 aaKnown RBP23.26■■□□□ 1.31
TRAF4-217ENST00000618771 PPP3CAQ08209 521 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 ZNF528Q3MIS6 628 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 ERCC4Q92889 916 aaPredicted RBP23.26■■□□□ 1.31
TRAF4-217ENST00000618771 SMARCE1Q969G3 411 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 SLC22A12Q96S37 553 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 FAM83CQ9BQN1 747 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 TTLL2Q9BWV7 592 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 IMPG2Q9BZV3 1241 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 CHRDQ9H2X0 955 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 MMRN2Q9H8L6 949 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 GKN1Q9NS71 199 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 TMEM30AQ9NV96 361 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 FBXO4Q9UKT5 387 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 PCDHA5Q9Y5H7 936 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 ATP8B3O60423 1300 aa23.26■■□□□ 1.31
TRAF4-217ENST00000618771 C2orf78A6NCI8 922 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 ASPAP45381 313 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 ITPRIPL2Q3MIP1 535 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 CC2D1AQ6P1N0 951 aaPredicted RBP23.25■■□□□ 1.31
TRAF4-217ENST00000618771 ARL14EPQ8N8R7 260 aaPredicted RBP23.25■■□□□ 1.31
TRAF4-217ENST00000618771 SPATA20Q8TB22 786 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 RIN3Q8TB24 985 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 EEF2KMTQ96G04 330 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 CYP2S1Q96SQ9 504 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 MED10Q9BTT4 135 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 LMAN1LQ9HAT1 526 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.25■■□□□ 1.311e-9■■■■■ 64.8
TRAF4-217ENST00000618771 TRPM5Q9NZQ8 1165 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 GCNT4Q9P109 453 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 MYO16Q9Y6X6 1858 aa23.25■■□□□ 1.31
TRAF4-217ENST00000618771 ATG2BQ96BY7 2078 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 CETN3O15182 167 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 EPB41P11171 864 aaKnown RBP23.24■■□□□ 1.31
TRAF4-217ENST00000618771 PDE6CP51160 858 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 NDST1P52848 882 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 MTAPQ13126 283 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 COBLL1Q53SF7 1204 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 TXNDC11Q6PKC3 985 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 ACOT1Q86TX2 421 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 FAM35AQ86V20 835 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 TAS1R2Q8TE23 839 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 IER2Q9BTL4 223 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 TMEM8AQ9HCN3 771 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 HMGXB4Q9UGU5 601 aa23.24■■□□□ 1.31
TRAF4-217ENST00000618771 CHRNB1P11230 501 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 HDCP19113 662 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 IFRD2Q12894 506 aaPredicted RBP23.23■■□□□ 1.31
TRAF4-217ENST00000618771 RUNX3Q13761 415 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 MTF1Q14872 753 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 TRIM68Q6AZZ1 485 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 UNC93AQ86WB7 457 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 ATRIPQ8WXE1 791 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 SMARCD1Q96GM5 515 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 TSG101Q99816 390 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 GTPBP4Q9BZE4 634 aaKnown RBP23.23■■□□□ 1.31
TRAF4-217ENST00000618771 EBF3Q9H4W6 596 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 HPS4Q9NQG7 708 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 DLL3Q9NYJ7 618 aa23.23■■□□□ 1.31
TRAF4-217ENST00000618771 NCDNQ9UBB6 729 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms