RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 HINFPQ9BQA5 517 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 ELOVL4Q9GZR5 314 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 KIF9Q9HAQ2 790 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 TMEM30AQ9NV96 361 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 FRYLO94915 3013 aa23.5■■□□□ 1.35
SYNGR3-206ENST00000618464 GREB1Q4ZG55 1949 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 C2orf78A6NCI8 922 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 IKBKBO14920 756 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 MAPK13O15264 365 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 CKMP06732 381 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 KRT13P13646 458 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 P4HA1P13674 534 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 RPL13P26373 211 aaKnown RBP23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 GCLMP48507 274 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 ORC1Q13415 861 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 ADAM9Q13443 819 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 ZCWPW2Q504Y3 356 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 ARL14EPQ8N8R7 260 aaPredicted RBP23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 MSANTD3Q96H12 275 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 C8orf48Q96LL4 319 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 MED10Q9BTT4 135 aa23.49■■□□□ 1.35
SYNGR3-206ENST00000618464 KIF26AQ9ULI4 1882 aaPredicted RBP23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 USP17L7P0C7H9 530 aa23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 PSMC2P35998 433 aaKnown RBP23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 MLLT6P55198 1093 aaPredicted RBP23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 FAM160A1Q05DH4 1040 aa23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 PPP3CAQ08209 521 aa23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 IFRD2Q12894 506 aaPredicted RBP23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 ITPRIPL2Q3MIP1 535 aa23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 CC2D1AQ6P1N0 951 aaPredicted RBP23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 INTS8Q75QN2 995 aaKnown RBP23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 ERMP1Q7Z2K6 904 aa23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 RALGPS2Q86X27 583 aaPredicted RBP23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 ENGASEQ8NFI3 743 aa23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 RMDN1Q96DB5 314 aa23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 CHRDQ9H2X0 955 aa23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 EBF3Q9H4W6 596 aa23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 RBM12Q9NTZ6 932 aaKnown RBP23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 RMND1Q9NWS8 449 aa23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 HMGXB4Q9UGU5 601 aa23.48■■□□□ 1.35
SYNGR3-206ENST00000618464 SOBPA7XYQ1 873 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 ASS1P00966 412 aaKnown RBP23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 CHRNB1P11230 501 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 ARSAP15289 507 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 ZNF268Q14587 947 aaPredicted RBP23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 PON2Q15165 354 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 ACOT1Q86TX2 421 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 FAM35AQ86V20 835 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 ZBTB44Q8NCP5 570 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 TAF4BQ92750 862 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 NELL1Q92832 810 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 TNIP3Q96KP6 325 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 CEP295NLQ96MC4 621 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 FAM83CQ9BQN1 747 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 TTLL2Q9BWV7 592 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 HPS4Q9NQG7 708 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 TRPM5Q9NZQ8 1165 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 GCNT4Q9P109 453 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 PCDHGA2Q9Y5H1 932 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 DMXL1Q9Y485 3027 aa23.47■■□□□ 1.35
SYNGR3-206ENST00000618464 ATP8B3O60423 1300 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 ABL1P00519 1130 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 PRCPP42785 496 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 ASPAP45381 313 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 NDST1P52848 882 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 NOP14P78316 857 aaKnown RBP23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 MTF1Q14872 753 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 WDR44Q5JSH3 913 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 C1orf228Q6PIY5 440 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 TAS1R2Q8TE23 839 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 ATRIPQ8WXE1 791 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 ANAPC1Q9H1A4 1944 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 PRMT8Q9NR22 394 aaPredicted RBP23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 ZSCAN32Q9NX65 697 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 EHD2Q9NZN4 543 aa23.46■■□□□ 1.35
SYNGR3-206ENST00000618464 OTOGLQ3ZCN5 2332 aa23.45■■□□□ 1.35
SYNGR3-206ENST00000618464 OTOL1A6NHN0 477 aaPredicted RBP23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 SMC2O95347 1197 aa23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 CCDC130P13994 396 aa23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 HDCP19113 662 aa23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 RUNX3Q13761 415 aa23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 LRRC32Q14392 662 aa23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 ZNF77Q15935 545 aa23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 EDRF1Q3B7T1 1238 aa23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 ZNF658Q5TYW1 1059 aaPredicted RBP23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 SMARCE1Q969G3 411 aa23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 KCNK16Q96T55 309 aa23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 IMPG2Q9BZV3 1241 aa23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 PCDHA5Q9Y5H7 936 aa23.45■■□□□ 1.34
SYNGR3-206ENST00000618464 LILRB5O75023 590 aa23.44■■□□□ 1.34
SYNGR3-206ENST00000618464 TAF10Q12962 218 aa23.44■■□□□ 1.34
SYNGR3-206ENST00000618464 USP4Q13107 963 aa23.44■■□□□ 1.34
SYNGR3-206ENST00000618464 Q6ZS52 159 aa23.44■■□□□ 1.34
SYNGR3-206ENST00000618464 PAQR9Q6ZVX9 377 aa23.44■■□□□ 1.34
SYNGR3-206ENST00000618464 SH3RF2Q8TEC5 729 aa23.44■■□□□ 1.34
SYNGR3-206ENST00000618464 GSDMAQ96QA5 445 aa23.44■■□□□ 1.34
SYNGR3-206ENST00000618464 APOBEC3GQ9HC16 384 aaKnown RBP23.44■■□□□ 1.34
SYNGR3-206ENST00000618464 KRT82Q9NSB4 513 aa23.44■■□□□ 1.34
SYNGR3-206ENST00000618464 FAM49BQ9NUQ9 324 aa23.44■■□□□ 1.34
SYNGR3-206ENST00000618464 WNT6Q9Y6F9 365 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms