RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 HSPBP1Q9NZL4 362 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 RWDD2AQ9UIY3 292 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 PADI3Q9ULW8 664 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 TMEM238LA0A1B0GVL6 79 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 PPP1R37O75864 691 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 COL6A1P12109 1028 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 ZNF16P17020 682 aaPredicted RBP12.66□□□□□ -0.38
SRRT-216ENST00000618262 MTIF2P46199 727 aaKnown RBP12.66□□□□□ -0.38
SRRT-216ENST00000618262 GEMIN4P57678 1058 aaKnown RBP12.66□□□□□ -0.38
SRRT-216ENST00000618262 DSTNP60981 165 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 GOLGA8FQ08AF8 430 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 GOLGA8DPQ0D2H9 430 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 CENPPQ6IPU0 288 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 TAF2Q6P1X5 1199 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 NLRP9Q7RTR0 991 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 IRF2BP1Q8IU81 584 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 USP38Q8NB14 1042 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 CNOT6LQ96LI5 555 aaKnown RBP12.66□□□□□ -0.38
SRRT-216ENST00000618262 TSG101Q99816 390 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 IFNKQ9P0W0 207 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 DACH1Q9UI36 760 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 EXOC7Q9UPT5 735 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 ARID2Q68CP9 1835 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 SPTBN5Q9NRC6 3674 aaKnown RBP12.66□□□□□ -0.38
SRRT-216ENST00000618262 COL1A2P08123 1366 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 TET1Q8NFU7 2136 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 CSF2RAP15509 400 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 VARSP26640 1264 aaKnown RBP12.66□□□□□ -0.38
SRRT-216ENST00000618262 ADCY8P40145 1251 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 ARHGEF18Q6ZSZ5 1173 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 MAP4K3Q8IVH8 894 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 SKA1Q96BD8 255 aa12.66□□□□□ -0.38
SRRT-216ENST00000618262 NTPCRQ9BSD7 190 aaKnown RBP12.66□□□□□ -0.38
SRRT-216ENST00000618262 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 TRIM64A6NGJ6 449 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 TRIM64BA6NI03 449 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 KCNJ18B7U540 433 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 BHMG1C9JSJ3 638 aaPredicted RBP12.65□□□□□ -0.38
SRRT-216ENST00000618262 SPTLC1O15269 473 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 KLK7P49862 253 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 CDK7P50613 346 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 XRCC4Q13426 336 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 DPYSQ14117 519 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 KCNJ12Q14500 433 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 LPIN1Q14693 890 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 BCL2A1Q16548 175 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 TCTN1Q2MV58 587 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 C6orf183Q5T699 404 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 SPATA1Q5VX52 437 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 DBF4BQ8NFT6 615 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 TRIM43Q96BQ3 446 aaPredicted RBP12.65□□□□□ -0.38
SRRT-216ENST00000618262 GIMAP5Q96F15 307 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 PRPF18Q99633 342 aaKnown RBP12.65□□□□□ -0.38
SRRT-216ENST00000618262 IFIH1Q9BYX4 1025 aaKnown RBP12.65□□□□□ -0.38
SRRT-216ENST00000618262 INPP5FQ9Y2H2 1132 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 REV3LO60673 3130 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 TEX33O43247 280 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 MAP3K13O43283 966 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 NBNO60934 754 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 APOEP02649 317 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 TUBBP07437 444 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 ADRB2P07550 413 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 CXCL8P10145 99 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 HOXA11P31270 313 aaPredicted RBP12.65□□□□□ -0.38
SRRT-216ENST00000618262 COPAP53621 1224 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 KIAA1614Q5VZ46 1190 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 STXBP4Q6ZWJ1 553 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 OTOP2Q7RTS6 562 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 RAVER1Q8IY67 606 aaKnown RBP12.65□□□□□ -0.38
SRRT-216ENST00000618262 TRPC4APQ8TEL6 797 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 RNF25Q96BH1 459 aaPredicted RBP12.65□□□□□ -0.38
SRRT-216ENST00000618262 ZFP42Q96MM3 310 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 SMC6Q96SB8 1091 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 ACO2Q99798 780 aaKnown RBP12.65□□□□□ -0.38
SRRT-216ENST00000618262 MRPL4Q9BYD3 311 aaKnown RBP12.65□□□□□ -0.38
SRRT-216ENST00000618262 HPS4Q9NQG7 708 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 SNTG2Q9NY99 539 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 PARP2Q9UGN5 583 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 AGO2Q9UKV8 859 aaKnown RBP12.65□□□□□ -0.38
SRRT-216ENST00000618262 TSC22D4Q9Y3Q8 395 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 TRPV2Q9Y5S1 764 aa12.65□□□□□ -0.38
SRRT-216ENST00000618262 VASPP50552 380 aaPredicted RBP12.64□□□□□ -0.39
SRRT-216ENST00000618262 B2MP61769 119 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 TUBB4BP68371 445 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 STK11Q15831 433 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 AMHR2Q16671 573 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 C15orf59Q2T9L4 293 aaPredicted RBP12.64□□□□□ -0.39
SRRT-216ENST00000618262 SARM1Q6SZW1 724 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 LRRC8DQ7L1W4 858 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 CPLX3Q8WVH0 158 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 CASP10Q92851 521 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 WNT8AQ9H1J5 351 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 TPK1Q9H3S4 243 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 PFDN4Q9NQP4 134 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 AVENQ9NQS1 362 aaPredicted RBP12.64□□□□□ -0.39
SRRT-216ENST00000618262 ACKR2O00590 384 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 BIRC5O15392 142 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 RAG1P15918 1043 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 HOXC8P31273 242 aa12.64□□□□□ -0.39
SRRT-216ENST00000618262 BASP1P80723 227 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms