RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 PTPN4P29074 926 aa13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 RNASELQ05823 741 aaKnown RBP13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 CBLBQ13191 982 aa13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 MAPK6Q16659 721 aa13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 BBS12Q6ZW61 710 aa13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 BANPQ8N9N5 519 aa13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 FNIP1Q8TF40 1166 aa13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 TMEM121Q9BTD3 319 aa13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 TARS2Q9BW92 718 aaKnown RBP13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 TRIM6Q9C030 488 aaPredicted RBP13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 ASCC2Q9H1I8 757 aaPredicted RBP13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 VPS11Q9H270 941 aa13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 KANSL3Q9P2N6 904 aa13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 MAFBQ9Y5Q3 323 aaPredicted RBP13.55□□□□□ -0.24
CLTCL1-210ENST00000617926 A0A0G2JMZ2 1700 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 FAM189A1O60320 539 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 IL1BP01584 269 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 DHRS4L1P0CG22 281 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 TROVE2P10155 538 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 KRT4P19013 534 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 BRD2P25440 801 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 EFTUD2Q15029 972 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 HP1BP3Q5SSJ5 553 aaPredicted RBP13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 ZFYVE27Q5T4F4 411 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 DCUN1D2Q6PH85 259 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 ZPBP2Q6X784 338 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 LONP2Q86WA8 852 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 CHSY1Q86X52 802 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 WDTC1Q8N5D0 677 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 TEX9Q8N6V9 391 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 CD99L2Q8TCZ2 262 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 DCAKDQ8WVC6 231 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 TMEM143Q96AN5 459 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 PAFAH2Q99487 392 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 NIFKQ9BYG3 293 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 ARHGAP39Q9C0H5 1083 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 NIF3L1Q9GZT8 377 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 FBXO40Q9UH90 709 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 ZFP69BQ9UJL9 534 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 STRIP2Q9ULQ0 834 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 ADAMTS5Q9UNA0 930 aa13.54□□□□□ -0.24
CLTCL1-210ENST00000617926 LRRIQ4A6NIV6 560 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 PEX10O60683 326 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 BANF1O75531 89 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 ECM2O94769 699 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 LMNAP02545 664 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 ADRA1DP25100 572 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 CTGFP29279 349 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 OTUD4Q01804 1114 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 SP3Q02447 781 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 TFDP1Q14186 410 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 TAF11Q15544 211 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 GNPTABQ3T906 1256 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 MSS51Q4VC12 460 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 TAF1BQ53T94 588 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 FNBP1LQ5T0N5 605 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 ANKRD22Q5VYY1 191 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 CLNKQ7Z7G1 428 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 ANKMY2Q8IV38 441 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.53□□□□□ -0.241e-6■■■■■ 92.8
CLTCL1-210ENST00000617926 ACTL9Q8TC94 416 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 PYROXD1Q8WU10 500 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 HAUS1Q96CS2 278 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 NAF1Q96HR8 494 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 CORO1CQ9ULV4 474 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 LRRC37A2A6NM11 1700 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 IGKV6D-21A0A0A0MT36 114 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 DNAJC6O75061 913 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 CBX6O95503 412 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 IFNB1P01574 187 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 KRT7P08729 469 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 PAX7P23759 505 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 EPHB2P29323 1055 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 ICAM3P32942 547 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 RPL22P35268 128 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 RFC5P40937 340 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 ABL2P42684 1182 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 PSEN1P49768 467 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 NEK3P51956 506 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 GDF10P55107 478 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 GAD2Q05329 585 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 FAM91A1Q658Y4 838 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 SNRNP48Q6IEG0 339 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 CAPN12Q6ZSI9 719 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 THNSL1Q8IYQ7 743 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 KIRREL3Q8IZU9 778 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 ACSF2Q96CM8 615 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 TUBB6Q9BUF5 446 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 ZNF302Q9NR11 478 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 CISHQ9NSE2 258 aa13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 ZNF214Q9UL59 606 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-210ENST00000617926 A6NHS1 94 aa13.52□□□□□ -0.25
CLTCL1-210ENST00000617926 SIGLEC16A6NMB1 481 aa13.52□□□□□ -0.25
CLTCL1-210ENST00000617926 ABLIM1O14639 778 aa13.52□□□□□ -0.25
CLTCL1-210ENST00000617926 ADCY3O60266 1144 aa13.52□□□□□ -0.25
CLTCL1-210ENST00000617926 LRCH4O75427 683 aa13.52□□□□□ -0.25
CLTCL1-210ENST00000617926 FAM155BO75949 473 aa13.52□□□□□ -0.25
CLTCL1-210ENST00000617926 TMEM63AO94886 807 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms