RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 IRGQQ8WZA9 623 aa12.38□□□□□ -0.43
PDPN-211ENST00000617617 YME1L1Q96TA2 773 aa12.38□□□□□ -0.43
PDPN-211ENST00000617617 LBHD1Q9BQE6 289 aaPredicted RBP12.38□□□□□ -0.43
PDPN-211ENST00000617617 TMEM51Q9NW97 253 aa12.38□□□□□ -0.43
PDPN-211ENST00000617617 HCSTQ9UBK5 93 aa12.38□□□□□ -0.43
PDPN-211ENST00000617617 IP6K2Q9UHH9 426 aa12.38□□□□□ -0.43
PDPN-211ENST00000617617 TMEM59LQ9UK28 342 aa12.38□□□□□ -0.43
PDPN-211ENST00000617617 SSX2IPQ9Y2D8 614 aa12.38□□□□□ -0.43
PDPN-211ENST00000617617 BUB1O43683 1085 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 DNAJC24Q6P3W2 148 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 SLC26A9Q7LBE3 791 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 FIBCD1Q8N539 461 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 C8orf48Q96LL4 319 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 SMOQ99835 787 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 NCAPGQ9BPX3 1015 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 TLR10Q9BXR5 811 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 IL37Q9NZH6 218 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 FNIP2Q9P278 1114 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 PROSCO94903 275 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 IBSPP21815 317 aaPredicted RBP12.37□□□□□ -0.43
PDPN-211ENST00000617617 NOP2P46087 812 aaKnown RBP12.37□□□□□ -0.43
PDPN-211ENST00000617617 SLC6A3Q01959 620 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 PIGHQ14442 188 aaPredicted RBP12.37□□□□□ -0.43
PDPN-211ENST00000617617 ZNF572Q7Z3I7 529 aaPredicted RBP12.37□□□□□ -0.43
PDPN-211ENST00000617617 ZMIZ2Q8NF64 920 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 LPIN3Q9BQK8 851 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 DMAP1Q9NPF5 467 aaPredicted RBP12.37□□□□□ -0.43
PDPN-211ENST00000617617 TMLHEQ9NVH6 421 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 CXXC1Q9P0U4 656 aaPredicted RBP12.37□□□□□ -0.43
PDPN-211ENST00000617617 SNX12Q9UMY4 172 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 PCDHB12Q9Y5F1 795 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 USP3Q9Y6I4 520 aa12.37□□□□□ -0.43
PDPN-211ENST00000617617 E5RJQ4 531 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 LILRB3O75022 631 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 TCP1P17987 556 aaKnown RBP12.36□□□□□ -0.43
PDPN-211ENST00000617617 ADORA2BP29275 332 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 CTXN3Q4LDR2 81 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 RTP2Q5QGT7 225 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 PM20D1Q6GTS8 502 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 SPPL2BQ8TCT7 592 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 SPATA17Q96L03 361 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 SAMD11Q96NU1 681 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 RXFP1Q9HBX9 757 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 CNGB3Q9NQW8 809 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDPN-211ENST00000617617 KRT82Q9NSB4 513 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 RNF14Q9UBS8 474 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 NR2E3Q9Y5X4 410 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 MRFAP1Q9Y605 127 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 TRIM66O15016 1216 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 SART1O43290 800 aaKnown RBP12.36□□□□□ -0.43
PDPN-211ENST00000617617 AP1G2O75843 785 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 ATP2A2P16615 1042 aaKnown RBP12.36□□□□□ -0.43
PDPN-211ENST00000617617 SSTR3P32745 418 aaPredicted RBP12.36□□□□□ -0.43
PDPN-211ENST00000617617 UBE3AQ05086 875 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 LRRC38Q5VT99 294 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 TPGS2Q68CL5 300 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 FAM183BPQ6ZVS7 135 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 PIGZQ86VD9 579 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 KHSRPQ92945 711 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDPN-211ENST00000617617 SELENOOQ9BVL4 669 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 AMFRQ9UKV5 643 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 ALG6Q9Y672 507 aa12.36□□□□□ -0.43
PDPN-211ENST00000617617 PAPSS1O43252 624 aaPredicted RBP12.35□□□□□ -0.43
PDPN-211ENST00000617617 ATMINO43313 823 aaPredicted RBP12.35□□□□□ -0.43
PDPN-211ENST00000617617 GLUD2P49448 558 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 ADCY1Q08828 1119 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 BNIPLQ7Z465 357 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 DAAM2Q86T65 1068 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 TMEM209Q96SK2 561 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 MED10Q9BTT4 135 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 C11orf84Q9BUA3 381 aaPredicted RBP12.35□□□□□ -0.43
PDPN-211ENST00000617617 ANAPC7Q9UJX3 599 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 TTC7AQ9ULT0 858 aaPredicted RBP12.35□□□□□ -0.43
PDPN-211ENST00000617617 HYOU1Q9Y4L1 999 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 PCDHB5Q9Y5E4 795 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 FAM92AA1XBS5 289 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 MYO1FO00160 1098 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 TULP2O00295 520 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 CLDN5O00501 218 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 TNFRSF10BO14763 440 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 DDX3YO15523 660 aaKnown RBP12.35□□□□□ -0.43
PDPN-211ENST00000617617 ABLIM3O94929 683 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 ATP1A1P05023 1023 aaKnown RBP12.35□□□□□ -0.43
PDPN-211ENST00000617617 KRT3P12035 628 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 CTNNA1P35221 906 aaKnown RBP12.35□□□□□ -0.43
PDPN-211ENST00000617617 EFHC1Q5JVL4 640 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 COL13A1Q5TAT6 717 aaPredicted RBP12.35□□□□□ -0.43
PDPN-211ENST00000617617 TAS1R1Q7RTX1 841 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 SPATA2LQ8IUW3 424 aaPredicted RBP12.35□□□□□ -0.43
PDPN-211ENST00000617617 TMEM169Q96HH4 297 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 PBKQ96KB5 322 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 TRIM62Q9BVG3 475 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 ZBP1Q9H171 429 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 CDC23Q9UJX2 597 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 IRAK3Q9Y616 596 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 SAR1BQ9Y6B6 198 aa12.35□□□□□ -0.43
PDPN-211ENST00000617617 C2CD4BA6NLJ0 364 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 ZBBXA8MT70 800 aa12.34□□□□□ -0.43
PDPN-211ENST00000617617 PSTPIP1O43586 416 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms