RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RXFP2Q8WXD0 754 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 CCDC114Q96M63 670 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 PWWP2AQ96N64 755 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 OSBPL8Q9BZF1 889 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 DNAJC17Q9NVM6 304 aaKnown RBP8.2□□□□□ -1.1
NEK3-207ENST00000617054 GPATCH2LQ9NWQ4 482 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 DDX43Q9NXZ2 648 aaKnown RBP8.2□□□□□ -1.1
NEK3-207ENST00000617054 COX16Q9P0S2 106 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 HCSTQ9UBK5 93 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 UTP11Q9Y3A2 253 aaKnown RBP8.2□□□□□ -1.1
NEK3-207ENST00000617054 MYBPHLA2RUH7 354 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 AGPSO00116 658 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 PHF2O75151 1096 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 ETS1P14921 441 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 MIPP30301 263 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 COILP38432 576 aaPredicted RBP8.2□□□□□ -1.1
NEK3-207ENST00000617054 PTGIRP43119 386 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 CACNA2D1P54289 1103 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 NRLP54845 237 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 MMRN1Q13201 1228 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 MAP9Q49MG5 647 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 TIGD5Q53EQ6 642 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 DSTYKQ6XUX3 929 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 ZNF280BQ86YH2 543 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 GLIS1Q8NBF1 620 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 B3GALNT2Q8NCR0 500 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 PEBP4Q96S96 227 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 TMEM209Q96SK2 561 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 NAP1L3Q99457 506 aaPredicted RBP8.2□□□□□ -1.1
NEK3-207ENST00000617054 RSAD1Q9HA92 442 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 LRRC4CQ9HCJ2 640 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 TMEM30AQ9NV96 361 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 HESX1Q9UBX0 185 aa8.2□□□□□ -1.1
NEK3-207ENST00000617054 KIAA0100Q14667 2235 aaKnown RBP8.19□□□□□ -1.1
NEK3-207ENST00000617054 THSD7BQ9C0I4 1608 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 FSCN2O14926 492 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 PQBP1O60828 265 aaKnown RBP8.19□□□□□ -1.1
NEK3-207ENST00000617054 GPR37L1O60883 481 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 STAU1O95793 577 aaKnown RBP8.19□□□□□ -1.1
NEK3-207ENST00000617054 KRT14P02533 472 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 ZSCAN5DPP0CG00 497 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 MCM3P25205 808 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 CST5P28325 142 aaPredicted RBP8.19□□□□□ -1.1
NEK3-207ENST00000617054 MAP2K2P36507 400 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 RPL21P46778 160 aaKnown RBP8.19□□□□□ -1.1
NEK3-207ENST00000617054 GATMP50440 423 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 EPHB4P54760 987 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 BCAR1P56945 870 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 MAP3K7CLP57077 242 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 PTK7Q13308 1070 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 SV2CQ496J9 727 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 PKDCCQ504Y2 493 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 STKLD1Q8NE28 680 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 UHMK1Q8TAS1 419 aaKnown RBP8.19□□□□□ -1.1
NEK3-207ENST00000617054 KHSRPQ92945 711 aaKnown RBP eCLIP8.19□□□□□ -1.16e-7■■□□□ 14.4
NEK3-207ENST00000617054 SLITRK1Q96PX8 696 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 NGRNQ9NPE2 291 aaKnown RBP8.19□□□□□ -1.1
NEK3-207ENST00000617054 STRIP2Q9ULQ0 834 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 TTC3P53804 2025 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 A0A0U1RQF3 1178 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 PBX3P40426 434 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 ZNF268Q14587 947 aaPredicted RBP8.19□□□□□ -1.1
NEK3-207ENST00000617054 PAQR9Q6ZVX9 377 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 FUKQ8N0W3 1084 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 NETO2Q8NC67 525 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 SPDYE1Q8NFV5 336 aaPredicted RBP8.19□□□□□ -1.1
NEK3-207ENST00000617054 FBXO25Q8TCJ0 367 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 PXYLP1Q8TE99 480 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 IPO4Q8TEX9 1081 aaKnown RBP8.19□□□□□ -1.1
NEK3-207ENST00000617054 MCRS1Q96EZ8 462 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 SCLYQ96I15 445 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 ZNF560Q96MR9 790 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 ERP44Q9BS26 406 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 MED10Q9BTT4 135 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 CALN1Q9BXU9 219 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 SLITRK6Q9H5Y7 841 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 TMPRSS4Q9NRS4 437 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 GDAP2Q9NXN4 497 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 CALCOCO1Q9P1Z2 691 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 MTUS1Q9ULD2 1270 aa8.19□□□□□ -1.1
NEK3-207ENST00000617054 PSTPIP1O43586 416 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 XPOTO43592 962 aaKnown RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 SYF2O95926 243 aaKnown RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 PTPN1P18031 435 aaKnown RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 GABRB2P47870 512 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 PITX1P78337 314 aaPredicted RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 NKX3-2P78367 333 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 PLCB3Q01970 1234 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 SLC25A11Q02978 314 aaKnown RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 MTM1Q13496 603 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 PIGHQ14442 188 aaPredicted RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 PPP1R7Q15435 360 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 UPP1Q16831 310 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 CCDC14Q49A88 953 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 ZC3H12AQ5D1E8 599 aaKnown RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 TRAF7Q6Q0C0 670 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 OLFML1Q6UWY5 402 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 LINC01599Q8WXQ3 324 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 B3GALT6Q96L58 329 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 CRTAC1Q9NQ79 661 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms