RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FUCA2Q9BTY2 467 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 RBSNQ9H1K0 784 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 SERTAD1Q9UHV2 236 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 MMP17Q9ULZ9 603 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 PCNX2A6NKB5 2137 aa18.89■□□□□ 0.61
TRAPPC3-209ENST00000616395 BECN2A8MW95 431 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 HAPLN1P10915 354 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 IFNAR2P48551 515 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 RAD51AP2Q09MP3 1159 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 EML3Q32P44 896 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 LYSMD4Q5XG99 296 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 TMEM92Q6UXU6 159 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 STKLD1Q8NE28 680 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 ADAM32Q8TC27 787 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 MRPS31Q92665 395 aaKnown RBP18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 EPSTI1Q96J88 318 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 RMND1Q9NWS8 449 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 PILRBQ9UKJ0 227 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 DNM3Q9UQ16 869 aa18.88■□□□□ 0.61
TRAPPC3-209ENST00000616395 TNRC6BQ9UPQ9 1833 aaKnown RBP18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 SMTNL1A8MU46 457 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 ALDH1A2O94788 518 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 ITPKAP23677 461 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 TNFSF9P41273 254 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 ZNF165P49910 485 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 MCL1Q07820 350 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 STRN3Q13033 797 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 MAPK7Q13164 816 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 ZNF77Q15935 545 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 ANO6Q4KMQ2 910 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 TMEM119Q4V9L6 283 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 HYIQ5T013 277 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 USP49Q70CQ1 688 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 LRRTM3Q86VH5 581 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 RNF214Q8ND24 703 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 OR2I1PQ8NGU4 316 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 SPACA7Q96KW9 195 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 CAMK1GQ96NX5 476 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 HAPLN2Q9GZV7 340 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 ABI2Q9NYB9 513 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 SLC6A14Q9UN76 642 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 MAGED2Q9UNF1 606 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 RAXQ9Y2V3 346 aa18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC3-209ENST00000616395 LACTBL1A8MY62 500 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 CLDN3O15551 220 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 OPHN1O60890 802 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 CLTAP09496 248 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 CD59P13987 128 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 PPP2R3AQ06190 1150 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 GFPT1Q06210 699 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 CCDC173Q0VFZ6 552 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 CT47A1Q5JQC4 288 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 PEAR1Q5VY43 1037 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 EFCAB13Q8IY85 973 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 KCTD17Q8N5Z5 321 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 MDM1Q8TC05 714 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 SPPL2BQ8TCT7 592 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 DRC1Q96MC2 740 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 CYP2S1Q96SQ9 504 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 PANK2Q9BZ23 570 aa18.86■□□□□ 0.61
TRAPPC3-209ENST00000616395 HELZ2Q9BYK8 2649 aaKnown RBP18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 CELSR3Q9NYQ7 3312 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 NPHP3-ACAD11A0A0J9YXS1 232 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 SFI1A8K8P3 1242 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 XPOTO43592 962 aaKnown RBP18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 CYP11A1P05108 521 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 PLCG1P19174 1290 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 OPRD1P41143 372 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 DPP6P42658 865 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 MATR3P43243 847 aaKnown RBP eCLIP18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 GPR15P49685 360 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 USP4Q13107 963 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 NR1H3Q13133 447 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 HNRNPDQ14103 355 aaKnown RBP18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 LMBRD2Q68DH5 695 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 RINT1Q6NUQ1 792 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 ZPBP2Q6X784 338 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 CCNI2Q6ZMN8 369 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 MINDY1Q8N5J2 469 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 PNPLA1Q8N8W4 532 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 GLIS3Q8NEA6 775 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 WHAMMQ8TF30 809 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 C2orf15Q8WU43 125 aaKnown RBP18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 ADAMTS14Q8WXS8 1223 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 GSDMAQ96QA5 445 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 SLC22A12Q96S37 553 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 LINC00597Q9H2U6 94 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 TRPC7Q9HCX4 862 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 STK17AQ9UEE5 414 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 TSC2P49815 1807 aa18.85■□□□□ 0.61
TRAPPC3-209ENST00000616395 ACTN4O43707 911 aaKnown RBP18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 TADA3O75528 432 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 PLA2G4BP0C869 781 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 HOXD12P35452 270 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 DHX8Q14562 1220 aaKnown RBP18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 TRIP6Q15654 476 aaKnown RBP18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 DUOXA1Q1HG43 343 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 MAP7D1Q3KQU3 841 aa18.84■□□□□ 0.61
TRAPPC3-209ENST00000616395 SPDYCQ5MJ68 293 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms