RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 COL26A1Q96A83 441 aa13.08□□□□□ -0.31
TCF4-248ENST00000616053 CHKBQ9Y259 395 aa13.08□□□□□ -0.31
TCF4-248ENST00000616053 KIF14Q15058 1648 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 SOWAHDA6NJG2 315 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 RHOCP08134 193 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 HOXB7P09629 217 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 RBP3P10745 1247 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 TLX1P31314 330 aaPredicted RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 MAGEA10P43363 369 aaPredicted RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 RAD23AP54725 363 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 NDUFA5Q16718 116 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 PPP1R16AQ96I34 528 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 SPG21Q9NZD8 308 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 KIF1CO43896 1103 aaKnown RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 CLK2P49760 499 aaKnown RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 CAV3P56539 151 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 MYBPC1Q00872 1141 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 SPIDRQ14159 915 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 SUZ12Q15022 739 aaKnown RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 GALNTL6Q49A17 601 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 RFX8Q6ZV50 586 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 SRBD1Q8N5C6 995 aaKnown RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 CDYLQ9Y232 598 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 HAUS5O94927 633 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 FGAP02671 866 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 ABCB1P08183 1280 aaPredicted RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 MYBL1P10243 752 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 ZSCAN26Q16670 478 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 INSCQ1MX18 579 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 TMEM159Q96B96 161 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 C18orf8Q96DM3 657 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 GPSM3Q9Y4H4 160 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 SMCO3A2RU48 225 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 FAM196BA6NMK8 535 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 HNRNPH1P31943 449 aaKnown RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 FBXL19Q6PCT2 694 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 CACTIN-AS1Q8N1I8 211 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 TRPC4APQ8TEL6 797 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 CAB39LQ9H9S4 337 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 POLR1BQ9H9Y6 1135 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 PCDHA10Q9Y5I2 948 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 SCAF11Q99590 1463 aaKnown RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 TBX3O15119 743 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 NOS2P35228 1153 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 RPL21P46778 160 aaKnown RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 GCLCP48506 637 aaPredicted RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 STK4Q13043 487 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 GALNT7Q86SF2 657 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 SLC13A5Q86YT5 568 aaPredicted RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 TMEM199Q8N511 208 aa13.08□□□□□ -0.32
TCF4-248ENST00000616053 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.32
TCF4-248ENST00000616053 CCDC22O60826 627 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 RHOBTB3O94955 611 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 HTR1BP28222 390 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 AXLP30530 894 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 PROSER1Q86XN7 944 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 OSBPL1AQ9BXW6 950 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 SENP6Q9GZR1 1112 aaPredicted RBP13.07□□□□□ -0.32
TCF4-248ENST00000616053 RRAGCQ9HB90 399 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 SLC24A3Q9HC58 644 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 SEC31BQ9NQW1 1179 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 FANCLQ9NW38 375 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 EFCAB5A4FU69 1503 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 PRAMEF22A3QJZ6 481 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 ARFIP2P53365 341 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 BDH1Q02338 343 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 SETMARQ53H47 684 aaPredicted RBP13.07□□□□□ -0.32
TCF4-248ENST00000616053 FAM220AQ7Z4H9 259 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 MAFFQ9ULX9 164 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 ZNF208O43345 1280 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 NPTXRO95502 500 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 CDC23Q9UJX2 597 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 POLR2EP19388 210 aaKnown RBP13.07□□□□□ -0.32
TCF4-248ENST00000616053 ZNF658Q5TYW1 1059 aaPredicted RBP13.07□□□□□ -0.32
TCF4-248ENST00000616053 NLRP10Q86W26 655 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 GPR135Q8IZ08 494 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 SERPINB12Q96P63 405 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 ADGRE3Q9BY15 652 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 TCEA3O75764 348 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 EPN2O95208 641 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 TFPIP10646 304 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 NR1D1P20393 614 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 HSD17B3P37058 310 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 SMYD1Q8NB12 490 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 FAM49BQ9NUQ9 324 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 DAGLAQ9Y4D2 1042 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 ZBTB5O15062 677 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 RCVRNP35243 200 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 PUS10Q3MIT2 529 aaKnown RBP13.07□□□□□ -0.32
TCF4-248ENST00000616053 FUT11Q495W5 492 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 TCEAL6Q6IPX3 200 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 SMYD4Q8IYR2 804 aaPredicted RBP13.07□□□□□ -0.32
TCF4-248ENST00000616053 PIGKQ92643 395 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 TRIM63Q969Q1 353 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 MLH1P40692 756 aa13.07□□□□□ -0.32
TCF4-248ENST00000616053 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
TCF4-248ENST00000616053 KRR1Q13601 381 aaKnown RBP13.07□□□□□ -0.32
TCF4-248ENST00000616053 HCAR2Q8TDS4 363 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms