RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 USP13Q92995 863 aaPredicted RBP19.53■□□□□ 0.72
SPAST-203ENST00000615843 OTULINQ96BN8 352 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 OTUB1Q96FW1 271 aaPredicted RBP19.53■□□□□ 0.72
SPAST-203ENST00000615843 DUX4Q9UBX2 424 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 CORO1CQ9ULV4 474 aaPredicted RBP19.53■□□□□ 0.72
SPAST-203ENST00000615843 SLC8A2Q9UPR5 921 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 SAC3D1A6NKF1 404 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 ZNF263O14978 683 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 NDUFS3O75489 264 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 RGS2P41220 211 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 DDR1Q08345 913 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 PKN2Q16513 984 aaKnown RBP19.53■□□□□ 0.72
SPAST-203ENST00000615843 TMC5Q6UXY8 1006 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 CLVS1Q8IUQ0 354 aaPredicted RBP19.53■□□□□ 0.72
SPAST-203ENST00000615843 PYGMP11217 842 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 CPA3P15088 417 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 LAMC2Q13753 1193 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 CNGA2Q16280 664 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 APBB2Q92870 758 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 ZFYVE19Q96K21 471 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 CD274Q9NZQ7 290 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 TBX20Q9UMR3 447 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 MYO3AQ8NEV4 1616 aa19.53■□□□□ 0.72
SPAST-203ENST00000615843 A0A087X0B3 334 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 PTDSS1P48651 473 aaKnown RBP19.52■□□□□ 0.72
SPAST-203ENST00000615843 CHRNB3Q05901 458 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 NT5C1AQ9BXI3 368 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 C1orf232A0A0U1RR37 186 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 SDR42E2A6NKP2 422 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 KPNA4O00629 521 aaPredicted RBP19.52■□□□□ 0.72
SPAST-203ENST00000615843 RGS5O15539 181 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 PDIA6Q15084 440 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 AFG1LQ8WV93 481 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 MASTLQ96GX5 879 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 FAM49BQ9NUQ9 324 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 INTS13Q9NVM9 706 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 FAM205AQ6ZU69 1335 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 SLCO1B7G3V0H7 640 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 MSH4O15457 936 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 OCM2P0CE71 109 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 OCMP0CE72 109 aaPredicted RBP19.52■□□□□ 0.72
SPAST-203ENST00000615843 FDX1P10109 184 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 RARAP10276 462 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 DRD4P21917 467 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 DENND5BQ6ZUT9 1274 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 ASIC4Q96FT7 647 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 KAZALD1Q96I82 304 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 PCDH9Q9HC56 1237 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 PRR12Q9ULL5 1215 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 PCDHGC5Q9Y5F6 944 aa19.52■□□□□ 0.72
SPAST-203ENST00000615843 TIMM44O43615 452 aa19.52■□□□□ 0.71
SPAST-203ENST00000615843 CLASP2O75122 1294 aaKnown RBP19.52■□□□□ 0.71
SPAST-203ENST00000615843 PTPN7P35236 360 aa19.52■□□□□ 0.71
SPAST-203ENST00000615843 PTK6Q13882 451 aa19.52■□□□□ 0.71
SPAST-203ENST00000615843 TMEM132DQ14C87 1099 aa19.52■□□□□ 0.71
SPAST-203ENST00000615843 PKN1Q16512 942 aa19.52■□□□□ 0.71
SPAST-203ENST00000615843 CCDC142Q17RM4 750 aa19.52■□□□□ 0.71
SPAST-203ENST00000615843 B3GNT6Q6ZMB0 384 aa19.52■□□□□ 0.71
SPAST-203ENST00000615843 TDRD5Q8NAT2 981 aaKnown RBP19.52■□□□□ 0.71
SPAST-203ENST00000615843 APOPT1Q96IL0 206 aa19.52■□□□□ 0.71
SPAST-203ENST00000615843 AGBL1Q96MI9 1066 aa19.52■□□□□ 0.71
SPAST-203ENST00000615843 LRRC4BQ9NT99 713 aa19.52■□□□□ 0.71
SPAST-203ENST00000615843 MTSS1O43312 755 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 GTF2H3Q13889 308 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 PCSK7Q16549 785 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 CBWD2Q8IUF1 395 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 SPATA33Q96N06 139 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 NPHP4O75161 1426 aaPredicted RBP19.51■□□□□ 0.71
SPAST-203ENST00000615843 SETD1BQ9UPS6 1966 aaKnown RBP19.51■□□□□ 0.71
SPAST-203ENST00000615843 DNALI1O14645 258 aaPredicted RBP19.51■□□□□ 0.71
SPAST-203ENST00000615843 ECE2O60344 883 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 SUPT7LO94864 414 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 C21orf59P57076 290 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 SLC45A4Q5BKX6 768 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 SLC47A2Q86VL8 602 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 MXRA8Q9BRK3 442 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 MMTAG2Q9BU76 263 aaKnown RBP19.51■□□□□ 0.71
SPAST-203ENST00000615843 THEMIS2Q5TEJ8 643 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 RIN3Q8TB24 985 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 PPP1R2P1Q96PQ5 205 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 THUMPD3Q9BV44 507 aaKnown RBP19.51■□□□□ 0.71
SPAST-203ENST00000615843 CYLDQ9NQC7 956 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 MYRFQ9Y2G1 1151 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 AVPR1AP37288 418 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 KRT33BQ14525 404 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 POU5F2Q8N7G0 328 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 OR6Y1Q8NGX8 325 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 RUVBL2Q9Y230 463 aaKnown RBP19.51■□□□□ 0.71
SPAST-203ENST00000615843 STARD13Q9Y3M8 1113 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 SALL1Q9NSC2 1324 aa19.51■□□□□ 0.71
SPAST-203ENST00000615843 RECQLP46063 649 aaPredicted RBP19.5■□□□□ 0.71
SPAST-203ENST00000615843 CSTF3Q12996 717 aaKnown RBP19.5■□□□□ 0.71
SPAST-203ENST00000615843 SPP2Q13103 211 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 LUZP2Q86TE4 346 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 EPS8L2Q9H6S3 715 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 TCF7L2Q9NQB0 619 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 TARBP1Q13395 1621 aaKnown RBP19.5■□□□□ 0.71
SPAST-203ENST00000615843 RNF103O00237 685 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 MAP3K6O95382 1288 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 MMRN1Q13201 1228 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms