RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 COL20A1Q9P218 1284 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 WNT6Q9Y6F9 365 aa6.17□□□□□ -1.42
SCAMP1-205ENST00000614488 ARHGEF17Q96PE2 2063 aaPredicted RBP6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 LOC102723971A0A1B0GUV8 181 aa6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 A1L4Q6 167 aa6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 LRRC3CA6NJW4 275 aa6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 PRKAG1P54619 331 aa6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 RPS16P62249 146 aaKnown RBP6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 AARS2Q5JTZ9 985 aaKnown RBP6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 CERCAMQ5T4B2 595 aa6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 ABRAQ8N0Z2 381 aa6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 KRT78Q8N1N4 520 aa6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 RP9Q8TA86 221 aaKnown RBP6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 DHX36Q9H2U1 1008 aaKnown RBP6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 DLL3Q9NYJ7 618 aa6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 ADAM21Q9UKJ8 722 aa6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 CDY1Q9Y6F8 540 aa6.16□□□□□ -1.42
SCAMP1-205ENST00000614488 H0YIZ8 118 aa6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 TJP3O95049 919 aa6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 MAP4K4O95819 1239 aaPredicted RBP6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 FESP07332 822 aa6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 ZKSCAN1P17029 563 aaPredicted RBP6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 ADORA2AP29274 412 aa6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 C3orf38Q5JPI3 329 aa6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 DEPDC1Q5TB30 811 aa6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 ZDHHC24Q6UX98 284 aa6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 SESTD1Q86VW0 696 aa6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 NTN5Q8WTR8 489 aaPredicted RBP6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 TIFAQ96CG3 184 aa6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 NUP62CLQ9H1M0 184 aa6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 GABRQQ9UN88 632 aa6.15□□□□□ -1.42
SCAMP1-205ENST00000614488 QSOX1O00391 747 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 FOXN3O00409 490 aaPredicted RBP6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 KIF3BO15066 747 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 FAM163BP0C2L3 166 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 TPTEP56180 551 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 CEP85Q6P2H3 762 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 AMIGO2Q86SJ2 522 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 IZUMO1Q8IYV9 350 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 SPARTQ8N0X7 666 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 LRRC71Q8N4P6 559 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 ZNF384Q8TF68 577 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 PPP2R3CQ969Q6 453 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 R3HDM4Q96D70 268 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 RSPRY1Q96DX4 576 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 FSD1LQ9BXM9 530 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 DUSP22Q9NRW4 184 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 DNMT3BQ9UBC3 853 aaKnown RBP6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 PADI4Q9UM07 663 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 PCDHGB6Q9Y5F9 930 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 SNX14Q9Y5W7 946 aa6.14□□□□□ -1.43
SCAMP1-205ENST00000614488 RASSF9O75901 435 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 ERBB2P04626 1255 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 PRKCBP05771 671 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 HNRNPCP07910 306 aaKnown RBP eCLIP6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 DLDP09622 509 aaKnown RBP6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 TXNP10599 105 aaKnown RBP6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 IL1R1P14778 569 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 CYP2C18P33260 490 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 BCAT1P54687 386 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 EEFSECP57772 596 aaKnown RBP6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 PROK1P58294 105 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 CCNIQ14094 377 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 HLTFQ14527 1009 aaKnown RBP eCLIP6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 MTHFD1LQ6UB35 978 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 PARS2Q7L3T8 475 aaKnown RBP6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 PTF1AQ7RTS3 328 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 SLC29A4Q7RTT9 530 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 YAF2Q8IY57 180 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 IPCEF1Q8WWN9 437 aaPredicted RBP6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 STRBPQ96SI9 672 aaKnown RBP6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 STK31Q9BXU1 1019 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 TRIM5Q9C035 493 aa6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 UNKQ9C0B0 810 aaKnown RBP6.13□□□□□ -1.43
SCAMP1-205ENST00000614488 RBMXL2O75526 392 aaKnown RBP6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 INMTO95050 263 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 NPSP0C0P6 89 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 ACVR2AP27037 513 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 PDE1AP54750 535 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 C21orf58P58505 322 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 ARHGEF7Q14155 803 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 FCRLBQ6BAA4 426 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 SUMO4Q6EEV6 95 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 ZNF788Q6ZQV5 615 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 Q6ZWC4 215 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 SMCR8Q8TEV9 937 aaPredicted RBP6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 XAGE5Q8WWM1 108 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 PHKBQ93100 1093 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 HDAC9Q9UKV0 1011 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 ADAMTS5Q9UNA0 930 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 TBC1D30Q9Y2I9 924 aa6.12□□□□□ -1.43
SCAMP1-205ENST00000614488 MASP2O00187 686 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 ZNF213O14771 459 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 CD3EAPO15446 510 aaKnown RBP6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 RRP9O43818 475 aaKnown RBP6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 SRGAP2O75044 1071 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 JTBO76095 146 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 ENGP17813 658 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 PRKAR1BP31321 381 aa6.11□□□□□ -1.43
SCAMP1-205ENST00000614488 PTDSS1P48651 473 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms